RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FUNDC2Q9BWH2 189 aa10.36□□□□□ -0.75
PRKDC-206ENST00000536429 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
PRKDC-206ENST00000536429 ETV7Q9Y603 341 aa10.36□□□□□ -0.75
PRKDC-206ENST00000536429 TRAV18A0A075B6X5 111 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 NBR2O15453 112 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 GSTP1P09211 210 aaKnown RBP10.35□□□□□ -0.75
PRKDC-206ENST00000536429 PTHLHP12272 177 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 SOX6P35712 828 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 SERPINB10P48595 397 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 DEFA6Q01524 100 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 SRSF7Q16629 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRKDC-206ENST00000536429 C5orf64Q2M2E5 130 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 KHDC1LQ5JSQ8 128 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 FOXRED2Q8IWF2 684 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 NPBQ8NG41 125 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 OR10J5Q8NHC4 309 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 CHPT1Q8WUD6 406 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 PHF21AQ96BD5 680 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 NAA50Q9GZZ1 169 aaKnown RBP10.35□□□□□ -0.75
PRKDC-206ENST00000536429 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 SDHAF2Q9NX18 166 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 SPATA2Q9UM82 520 aa10.35□□□□□ -0.75
PRKDC-206ENST00000536429 IGHV7-81A0A0B4J1V7 117 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 OR5H14A6NHG9 310 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 G3V4G9 280 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 J3QRK9 145 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 M0R1X1 148 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 AP4M1O00189 453 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 WIPF1O43516 503 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 RRP9O43818 475 aaKnown RBP10.34□□□□□ -0.75
PRKDC-206ENST00000536429 NDUFA3O95167 84 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 IGKV1-16P04430 117 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 FCER2P06734 321 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 SCAND1P57086 179 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 GNG2P59768 71 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 VBP1P61758 197 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 NDPQ00604 133 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 CFHR3Q02985 330 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 ARL6IP1Q15041 203 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 H1FOOQ8IZA3 346 aaPredicted RBP10.34□□□□□ -0.75
PRKDC-206ENST00000536429 GVQW1Q8N7I0 195 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 OR4F17Q8NGA8 305 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 OR4F4Q96R69 305 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 GINS4Q9BRT9 223 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 FBXL15Q9H469 300 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
PRKDC-206ENST00000536429 H7C2Y5 167 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 FCN1O00602 326 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 SCGNO76038 276 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 DIRAS3O95661 229 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 TFAP2AP05549 437 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 NFYAP23511 347 aaPredicted RBP10.33□□□□□ -0.76
PRKDC-206ENST00000536429 PNLIPRP3Q17RR3 467 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 GHITMQ9H3K2 345 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 AUNIPQ9H7T9 357 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 WSB1Q9Y6I7 421 aa10.33□□□□□ -0.76
PRKDC-206ENST00000536429 G3V318 75 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 RRHO14718 337 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 IGF1P05019 195 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
PRKDC-206ENST00000536429 PF4V1P10720 104 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 MC5RP33032 325 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 RPL23AP62750 156 aaKnown RBP10.32□□□□□ -0.76
PRKDC-206ENST00000536429 ETV3LQ6ZN32 361 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-206ENST00000536429 SLC25A46Q96AG3 418 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 DCSTAMPQ9H295 470 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 PARP11Q9NR21 331 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 TPSG1Q9NRR2 321 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 FBXO7Q9Y3I1 522 aa10.32□□□□□ -0.76
PRKDC-206ENST00000536429 IGKV1D-13A0A0B4J2D9 117 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 MEIS3P1A6NDR6 274 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 IGKV1-13P0DP09 117 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 SLC35B1P78383 322 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 PITPNAQ00169 270 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 PSG5Q15238 335 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 LIN54Q6MZP7 749 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 SAMD12Q8N8I0 201 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 CLCC1Q96S66 551 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 OR51J1Q9H342 316 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 SLC35D1Q9NTN3 355 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 KIAA1456Q9P272 454 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 ANXA10Q9UJ72 324 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 GAB2Q9UQC2 676 aa10.31□□□□□ -0.76
PRKDC-206ENST00000536429 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
PRKDC-206ENST00000536429 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 A0A0A6YYH2 397 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 A6NJ64 397 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 LINC00473A8K010 186 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 XRCC3O43542 346 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 TMEM127O75204 238 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 RBBP9O75884 186 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 IGLV2-14P01704 120 aa10.3□□□□□ -0.76
PRKDC-206ENST00000536429 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms