RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 OR5AU1Q8NGC0 362 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 OR8U1Q8NH10 309 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 CMTM3Q96MX0 182 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 GINS4Q9BRT9 223 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 ANXA10Q9UJ72 324 aa16.17■□□□□ 0.18
CCS-208ENST00000533244 TSPAN15O95858 294 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 MC5RP33032 325 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 CD83Q01151 205 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 MMDQ15546 238 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 GLDNQ6ZMI3 551 aaPredicted RBP16.16■□□□□ 0.18
CCS-208ENST00000533244 SLC35E3Q7Z769 313 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 CENPVQ7Z7K6 275 aaPredicted RBP16.16■□□□□ 0.18
CCS-208ENST00000533244 HOGA1Q86XE5 327 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 NPBQ8NG41 125 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 ACOT12Q8WYK0 555 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 C5orf30Q96GV9 206 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 OR2D2Q9H210 308 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 SDHAF2Q9NX18 166 aa16.16■□□□□ 0.18
CCS-208ENST00000533244 ADARB2-AS1A8MUL3 147 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 NDUFA3O95167 84 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 PTHLHP12272 177 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 CNTFRP26992 372 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 RORCP51449 518 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 TCTEX1D4Q5JR98 221 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 GVQW1Q8N7I0 195 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 ZNF383Q8NA42 475 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 CITED2Q99967 270 aaPredicted RBP16.15■□□□□ 0.18
CCS-208ENST00000533244 RASL11BQ9BPW5 248 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 MMP27Q9H306 513 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 WASHC3Q9Y3C0 194 aa16.15■□□□□ 0.18
CCS-208ENST00000533244 LINC01548A6NM66 108 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 NBR2O15453 112 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 APOA1P02647 267 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 EIF4EP06730 217 aaKnown RBP16.14■□□□□ 0.17
CCS-208ENST00000533244 TAS2R20P59543 309 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 C10orf99Q6UWK7 81 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 NDUFA11Q86Y39 141 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
CCS-208ENST00000533244 BEST4Q8NFU0 473 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 NOL4LQ96MY1 436 aaPredicted RBP16.14■□□□□ 0.17
CCS-208ENST00000533244 HSPB9Q9BQS6 159 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 COMMD3Q9UBI1 195 aa16.14■□□□□ 0.17
CCS-208ENST00000533244 M0R1X1 148 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 KCNAB3O43448 404 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 RBBP9O75884 186 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 CSF1P09603 554 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 CBX5P45973 191 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 LINC00205P59089 165 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 TMEM69Q5SWH9 247 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 FOXRED2Q8IWF2 684 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 CHPT1Q8WUD6 406 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 RNF5Q99942 180 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 ZNF580Q9UK33 172 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 ANAPC10Q9UM13 185 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 OR2W1Q9Y3N9 320 aa16.13■□□□□ 0.17
CCS-208ENST00000533244 PSMB11A5LHX3 300 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 AP4M1O00189 453 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 TUSC2O75896 110 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 HLA-DRB1P01911 266 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 HLA-DQB1P01920 261 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 SOX6P35712 828 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
CCS-208ENST00000533244 C5orf64Q2M2E5 130 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 STPG2Q8N412 459 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 SNAPC3Q92966 411 aa16.12■□□□□ 0.17
CCS-208ENST00000533244 ZNF182P17025 639 aaPredicted RBP16.11■□□□□ 0.17
CCS-208ENST00000533244 NFYAP23511 347 aaPredicted RBP16.11■□□□□ 0.17
CCS-208ENST00000533244 PDPNQ86YL7 162 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 CLVS1Q8IUQ0 354 aaPredicted RBP16.11■□□□□ 0.17
CCS-208ENST00000533244 OR4X2Q8NGF9 303 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 BCL7BQ9BQE9 202 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 ZNF107Q9UII5 783 aaPredicted RBP16.11■□□□□ 0.17
CCS-208ENST00000533244 LINC00527Q9UJ94 153 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 H7C2Y5 167 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 APOA2P02652 100 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 IGKV1-16P04430 117 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 IGF1P05019 195 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 RAB2BQ8WUD1 216 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 AP3S1Q92572 193 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
CCS-208ENST00000533244 RBM7Q9Y580 266 aaKnown RBP16.11■□□□□ 0.17
CCS-208ENST00000533244 IGKV1D-13A0A0B4J2D9 117 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 RRHO14718 337 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 HPGDSO60760 199 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 OPN1MWP04001 364 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 OPN1MW2P0DN77 364 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 OPN1MW3P0DN78 364 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 IGKV1-13P0DP09 117 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 ELK1P19419 428 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 LUMP51884 338 aaPredicted RBP16.1■□□□□ 0.17
CCS-208ENST00000533244 TMBIM6P55061 237 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 ARPC4P59998 168 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 SPCS2Q15005 226 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 ZNF329Q86UD4 541 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 ZNF645Q8N7E2 425 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 DDB2Q92466 427 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 SLC35D1Q9NTN3 355 aa16.1■□□□□ 0.17
CCS-208ENST00000533244 IGHV7-81A0A0B4J1V7 117 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 SPDEFO95238 335 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 IGLV2-14P01704 120 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms