RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 H1FOOQ8IZA3 346 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 NPBQ8NG41 125 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 NOL4LQ96MY1 436 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 NAA50Q9GZZ1 169 aaKnown RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 AUNIPQ9H7T9 357 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 OR5H14A6NHG9 310 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 H0YJW9 148 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 CTXN2P0C2S0 81 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 CNTFRP26992 372 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 MMDQ15546 238 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 FAM131AQ6UXB0 335 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 GLDNQ6ZMI3 551 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 DRAXINQ8NBI3 349 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 CHPT1Q8WUD6 406 aa13.29□□□□□ -0.28
HIF3A-211ENST00000528563 KCTD12Q96CX2 325 aaKnown RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 S100A16Q96FQ6 103 aaKnown RBP13.29□□□□□ -0.28
HIF3A-211ENST00000528563 NOTCH3Q9UM47 2321 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 XRCC3O43542 346 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 GABARAPO95166 117 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 SOX6P35712 828 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 LINC00205P59089 165 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 UBE2NLQ5JXB2 153 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 CNIH2Q6PI25 160 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 SAMD12Q8N8I0 201 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 ZNF383Q8NA42 475 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 FAM110DQ8TAY7 271 aaPredicted RBP13.28□□□□□ -0.28
HIF3A-211ENST00000528563 GINS4Q9BRT9 223 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 ANXA10Q9UJ72 324 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 WASHC3Q9Y3C0 194 aa13.28□□□□□ -0.28
HIF3A-211ENST00000528563 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 AP4M1O00189 453 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 NBR2O15453 112 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 GPR107Q5VW38 600 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 ZNF329Q86UD4 541 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 FOXRED2Q8IWF2 684 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 STPG2Q8N412 459 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 RNF5Q99942 180 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 HSPB9Q9BQS6 159 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 SDHAF2Q9NX18 166 aa13.27□□□□□ -0.29
HIF3A-211ENST00000528563 KCNAB3O43448 404 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 RBBP9O75884 186 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 NDUFA3O95167 84 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 PTHLHP12272 177 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 C5orf64Q2M2E5 130 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 HOGA1Q86XE5 327 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 OR2D2Q9H210 308 aa13.26□□□□□ -0.29
HIF3A-211ENST00000528563 TCRBV4S1A1TA0A5B7 111 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 H7C2Y5 167 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 M0R1X1 148 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 PLXNB1O43157 2135 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 OPN1MWP04001 364 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 OPN1MW2P0DN77 364 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 OPN1MW3P0DN78 364 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 RORCP51449 518 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 LIN54Q6MZP7 749 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 GPR141Q7Z602 305 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 GVQW1Q8N7I0 195 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 BEST4Q8NFU0 473 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 C5orf30Q96GV9 206 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 CMTM3Q96MX0 182 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 ZNF107Q9UII5 783 aaPredicted RBP13.25□□□□□ -0.29
HIF3A-211ENST00000528563 OR2W1Q9Y3N9 320 aa13.25□□□□□ -0.29
HIF3A-211ENST00000528563 TSSC4Q9Y5U2 329 aaPredicted RBP13.25□□□□□ -0.29
HIF3A-211ENST00000528563 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 HLA-DQB1P01920 261 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 IGKV1-16P04430 117 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 IGF1P05019 195 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 NFYAP23511 347 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-211ENST00000528563 ACOT12Q8WYK0 555 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 COMMD3Q9UBI1 195 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 ZNF580Q9UK33 172 aa13.24□□□□□ -0.29
HIF3A-211ENST00000528563 RBM7Q9Y580 266 aaKnown RBP13.24□□□□□ -0.29
HIF3A-211ENST00000528563 RRHO14718 337 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 TUSC2O75896 110 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 APOA1P02647 267 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 EIF4EP06730 217 aaKnown RBP13.23□□□□□ -0.29
HIF3A-211ENST00000528563 CBX5P45973 191 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 SLC35B1P78383 322 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 PDPNQ86YL7 162 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 COMMD1Q8N668 190 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 R3HDM4Q96D70 268 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 OR4F4Q96R69 305 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 KIAA1456Q9P272 454 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 IGHV7-81A0A0B4J1V7 117 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 A0A1W2PRX2 142 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 LUMP51884 338 aaPredicted RBP13.23□□□□□ -0.29
HIF3A-211ENST00000528563 TAS2R20P59543 309 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
HIF3A-211ENST00000528563 CFHR3Q02985 330 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 TMEM69Q5SWH9 247 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 FLYWCH2Q96CP2 140 aaKnown RBP13.23□□□□□ -0.29
HIF3A-211ENST00000528563 OR51J1Q9H342 316 aa13.23□□□□□ -0.29
HIF3A-211ENST00000528563 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms