RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 AUNIPQ9H7T9 357 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 PLSCR3Q9NRY6 295 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 KIAA1456Q9P272 454 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 RNF150Q9ULK6 438 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
NXF1-204ENST00000527064 IGKV1D-8A0A087WSZ0 117 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 H0YJW9 148 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 H7C2Y5 167 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 NBR2O15453 112 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 APOA2P02652 100 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 OR8U9P0C7N5 309 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 CD28P10747 220 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 SOX6P35712 828 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 F2RL1P55085 397 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 ARPC4P59998 168 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 OR5AN1Q8NGI8 311 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 OR8U1Q8NH10 309 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 GON7Q9BXV9 100 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 NAA50Q9GZZ1 169 aaKnown RBP11.41□□□□□ -0.58
NXF1-204ENST00000527064 COMMD3Q9UBI1 195 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
NXF1-204ENST00000527064 TET2Q6N021 2002 aaPredicted RBP11.41□□□□□ -0.58
NXF1-204ENST00000527064 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 PSMB11A5LHX3 300 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 M0R1X1 148 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 AP4M1O00189 453 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 NOL3O60936 208 aaKnown RBP11.4□□□□□ -0.58
NXF1-204ENST00000527064 APOA1P02647 267 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 OPN1MWP04001 364 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 OPN1MW2P0DN77 364 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 OPN1MW3P0DN78 364 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 SLC35B1P78383 322 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 TAGLNQ01995 201 aaKnown RBP11.4□□□□□ -0.58
NXF1-204ENST00000527064 CBX3Q13185 183 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 GLDNQ6ZMI3 551 aaPredicted RBP11.4□□□□□ -0.58
NXF1-204ENST00000527064 HOGA1Q86XE5 327 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 PDPNQ86YL7 162 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 BEST4Q8NFU0 473 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 RAB2BQ8WUD1 216 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 RNF5Q99942 180 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 BCL7BQ9BQE9 202 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 IFT46Q9NQC8 304 aa11.4□□□□□ -0.58
NXF1-204ENST00000527064 SLC22A5O76082 557 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 RPL5P46777 297 aaKnown RBP11.39□□□□□ -0.59
NXF1-204ENST00000527064 TAS2R20P59543 309 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 STPG2Q8N412 459 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 COMMD1Q8N668 190 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 DRAXINQ8NBI3 349 aaPredicted RBP11.39□□□□□ -0.59
NXF1-204ENST00000527064 NPBQ8NG41 125 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
NXF1-204ENST00000527064 NECAP2Q9NVZ3 263 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 SDHAF2Q9NX18 166 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 ZNF107Q9UII5 783 aaPredicted RBP11.39□□□□□ -0.59
NXF1-204ENST00000527064 OR2W1Q9Y3N9 320 aa11.39□□□□□ -0.59
NXF1-204ENST00000527064 TRRAPQ9Y4A5 3859 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 NDUFA3O95167 84 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 SPDEFO95238 335 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 TSPAN15O95858 294 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 EIF4EP06730 217 aaKnown RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 ZNF182P17025 639 aaPredicted RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 NFYAP23511 347 aaPredicted RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 THBS3P49746 956 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 LUMP51884 338 aaPredicted RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 PLGLAQ15195 96 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 NSUN5P1Q3KNT7 163 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 CLVS1Q8IUQ0 354 aaPredicted RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 ZNF645Q8N7E2 425 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 ZNF383Q8NA42 475 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 TSNAXQ99598 290 aaKnown RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
NXF1-204ENST00000527064 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
NXF1-204ENST00000527064 TCRBV4S1A1TA0A5B7 111 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 PROP1O75360 226 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 HLA-DQB1P01920 261 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 OR5H8P0DN80 308 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 RRASP10301 218 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 CNTFRP26992 372 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 PRSS3P35030 304 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 TMBIM6P55061 237 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 CD83Q01151 205 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 C5orf64Q2M2E5 130 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 GVQW1Q8N7I0 195 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 OR4F17Q8NGA8 305 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 FLYWCH2Q96CP2 140 aaKnown RBP11.37□□□□□ -0.59
NXF1-204ENST00000527064 RITA1Q96K30 269 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 NOL4LQ96MY1 436 aaPredicted RBP11.37□□□□□ -0.59
NXF1-204ENST00000527064 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 SLC35D1Q9NTN3 355 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 SCOCQ9UIL1 159 aa11.37□□□□□ -0.59
NXF1-204ENST00000527064 FAM25AB3EWG3 89 aa11.36□□□□□ -0.59
NXF1-204ENST00000527064 FAM25CB3EWG5 89 aa11.36□□□□□ -0.59
NXF1-204ENST00000527064 FAM25GB3EWG6 89 aa11.36□□□□□ -0.59
NXF1-204ENST00000527064 RRHO14718 337 aa11.36□□□□□ -0.59
NXF1-204ENST00000527064 HPGDSO60760 199 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms