RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 LINC00205P59089 165 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 ACTBP60709 375 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 GVQW1Q8N7I0 195 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 OR5AU1Q8NGC0 362 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 RASL11BQ9BPW5 248 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 RBM7Q9Y580 266 aaKnown RBP12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 CMYA5Q8N3K9 4069 aa12.85□□□□□ -0.35
SSSCA1-202ENST00000526433 VWFP04275 2813 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 LINC01548A6NM66 108 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 H0YJW9 148 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 M0R1X1 148 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 IGHG2P01859 326 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 APOA1P02647 267 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 EIF4EP06730 217 aaKnown RBP12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 CNTFRP26992 372 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 TAS2R20P59543 309 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 TMEM69Q5SWH9 247 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 HOGA1Q86XE5 327 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 SDHAF2Q9NX18 166 aa12.84□□□□□ -0.35
SSSCA1-202ENST00000526433 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 H7C2Y5 167 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 J3QRK9 145 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 HPGDSO60760 199 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 FCER2P06734 321 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 NFYAP23511 347 aaPredicted RBP12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 CBX5P45973 191 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 MMDQ15546 238 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 MZT2AQ6P582 158 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 FAM71E2Q8N5Q1 922 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 ZNF383Q8NA42 475 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 WASHC3Q9Y3C0 194 aa12.83□□□□□ -0.36
SSSCA1-202ENST00000526433 PLXNB1O43157 2135 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 MEIS3P1A6NDR6 274 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 HLA-DQB1P01920 261 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 ELK1P19419 428 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 TMBIM6P55061 237 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 SPCS2Q15005 226 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 C10orf99Q6UWK7 81 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 TREML4Q6UXN2 200 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 NPBQ8NG41 125 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 AP3S1Q92572 193 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 NOL4LQ96MY1 436 aaPredicted RBP12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 CITED2Q99967 270 aaPredicted RBP12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 MRPS7Q9Y2R9 242 aaKnown RBP12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 OR2W1Q9Y3N9 320 aa12.82□□□□□ -0.36
SSSCA1-202ENST00000526433 NBR2O15453 112 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 RBBP9O75884 186 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 CSF1P09603 554 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 PRSS3P35030 304 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 SOX6P35712 828 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 LUMP51884 338 aaPredicted RBP12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 ARPC4P59998 168 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 CD83Q01151 205 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 NSUN5P1Q3KNT7 163 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 RNF5Q99942 180 aa12.81□□□□□ -0.36
SSSCA1-202ENST00000526433 PSMB11A5LHX3 300 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 KCNAB3O43448 404 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 TSPAN15O95858 294 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 APOA2P02652 100 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 C5orf64Q2M2E5 130 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 LIN54Q6MZP7 749 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 ZNF329Q86UD4 541 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 SNAPC3Q92966 411 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 BCL7BQ9BQE9 202 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 HSPB9Q9BQS6 159 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 IFT46Q9NQC8 304 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 SLC35D1Q9NTN3 355 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 SCOCQ9UIL1 159 aa12.8□□□□□ -0.36
SSSCA1-202ENST00000526433 IGKV1D-13A0A0B4J2D9 117 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FAM25AB3EWG3 89 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FAM25CB3EWG5 89 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FAM25GB3EWG6 89 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 AP4M1O00189 453 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 TUSC2O75896 110 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 NDUFA3O95167 84 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 IGKV1-13P0DP09 117 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 FCGR2CP31995 323 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 THBS3P49746 956 aa12.79□□□□□ -0.36
SSSCA1-202ENST00000526433 RPS16P62249 146 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms