RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PLXNB1O43157 2135 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 GABARAPO95166 117 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 TFAP2AP05549 437 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 ALDH3B2P48448 385 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 GPR107Q5VW38 600 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 LCNL1Q6ZST4 164 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 C18orf65Q6ZTR6 163 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 NDUFA11Q86Y39 141 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 MRPS26Q9BYN8 205 aaKnown RBP14.07□□□□□ -0.16
CLK4-211ENST00000522556 SDHAF2Q9NX18 166 aa14.07□□□□□ -0.16
CLK4-211ENST00000522556 PSMB11A5LHX3 300 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 M0R1X1 148 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 SCGNO76038 276 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 EIF4EP06730 217 aaKnown RBP14.06□□□□□ -0.16
CLK4-211ENST00000522556 NFYAP23511 347 aaPredicted RBP14.06□□□□□ -0.16
CLK4-211ENST00000522556 NDPQ00604 133 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 SRSF7Q16629 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLK4-211ENST00000522556 PNLIPRP3Q17RR3 467 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 STPG2Q8N412 459 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 SAMD12Q8N8I0 201 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 OR5AN1Q8NGI8 311 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 GINS4Q9BRT9 223 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 AUNIPQ9H7T9 357 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 ZNF221Q9UK13 617 aa14.06□□□□□ -0.16
CLK4-211ENST00000522556 IGKV1D-13A0A0B4J2D9 117 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 NBR2O15453 112 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 IGKV1-16P04430 117 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 IGKV1-13P0DP09 117 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 ARL6IP1Q15041 203 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 KHDC1LQ5JSQ8 128 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 UBE2NLQ5JXB2 153 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 ANKRD13BQ86YJ7 626 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 OR8H1Q8NGG4 311 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 FBXL15Q9H469 300 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 TPSG1Q9NRR2 321 aa14.05□□□□□ -0.16
CLK4-211ENST00000522556 TCRBV4S1A1TA0A5B7 111 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 OR5H14A6NHG9 310 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 H7C2Y5 167 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 NDUFA3O95167 84 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 DIRAS3O95661 229 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 SOX6P35712 828 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 C1QL4Q86Z23 238 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 CROCCP3Q8IVE0 287 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 NPBQ8NG41 125 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 SNAPC3Q92966 411 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 R3HDM4Q96D70 268 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 DCSTAMPQ9H295 470 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 ANXA10Q9UJ72 324 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 WASHC3Q9Y3C0 194 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 FBXO7Q9Y3I1 522 aa14.04□□□□□ -0.16
CLK4-211ENST00000522556 IGHV7-81A0A0B4J1V7 117 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 PITPNAQ00169 270 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 C5orf64Q2M2E5 130 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 FOXRED2Q8IWF2 684 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 DIABLOQ9NR28 239 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 COMMD3Q9UBI1 195 aa14.03□□□□□ -0.16
CLK4-211ENST00000522556 A0A0A6YYH2 397 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 A6NJ64 397 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 AP4M1O00189 453 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 FCN1O00602 326 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 RRHO14718 337 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 ATP6V0E1O15342 81 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 XRCC3O43542 346 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 TAS2R20P59543 309 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 CFHR3Q02985 330 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.02□□□□□ -0.17
CLK4-211ENST00000522556 BEST4Q8NFU0 473 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 CHPT1Q8WUD6 406 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 GAB2Q9UQC2 676 aa14.02□□□□□ -0.17
CLK4-211ENST00000522556 RBM7Q9Y580 266 aaKnown RBP14.02□□□□□ -0.17
CLK4-211ENST00000522556 MEGF8Q7Z7M0 2845 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 LINC00473A8K010 186 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 G3V318 75 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 HPGDSO60760 199 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 TMEM127O75204 238 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 IGLV2-14P01704 120 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 HLA-DRB1P01911 266 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 OPN1MWP04001 364 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 OPN1MW2P0DN77 364 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 OPN1MW3P0DN78 364 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 SPCS2Q15005 226 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 CNIH2Q6PI25 160 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 GPR141Q7Z602 305 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 HOGA1Q86XE5 327 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 GPHA2Q96T91 129 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 PARP11Q9NR21 331 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 SLC35D1Q9NTN3 355 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 TSSC4Q9Y5U2 329 aaPredicted RBP14.01□□□□□ -0.17
CLK4-211ENST00000522556 WSB1Q9Y6I7 421 aa14.01□□□□□ -0.17
CLK4-211ENST00000522556 TUSC2O75896 110 aa14□□□□□ -0.17
CLK4-211ENST00000522556 IGLV2-23P01705 113 aa14□□□□□ -0.17
CLK4-211ENST00000522556 MC5RP33032 325 aa14□□□□□ -0.17
CLK4-211ENST00000522556 PSG5Q15238 335 aa14□□□□□ -0.17
CLK4-211ENST00000522556 TMEM69Q5SWH9 247 aa14□□□□□ -0.17
CLK4-211ENST00000522556 ETV3LQ6ZN32 361 aa14□□□□□ -0.17
CLK4-211ENST00000522556 BVESQ8NE79 360 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms