RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 C9orf152Q5JTZ5 239 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 GPR107Q5VW38 600 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 CNIH2Q6PI25 160 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 CENPVQ7Z7K6 275 aaPredicted RBP9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 HOGA1Q86XE5 327 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 NDUFA11Q86Y39 141 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 OR8U1Q8NH10 309 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 PHF21AQ96BD5 680 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 C5orf30Q96GV9 206 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 CMTM3Q96MX0 182 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 NOL4LQ96MY1 436 aaPredicted RBP9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 RNF5Q99942 180 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 MMP27Q9H306 513 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 ANXA10Q9UJ72 324 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 ZNF221Q9UK13 617 aa9.27□□□□□ -0.93
HMGXB3-203ENST00000510472 TUSC2O75896 110 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 PTHLHP12272 177 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 CNTFRP26992 372 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 GNG2P59768 71 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 MMDQ15546 238 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 C2orf68Q2NKX9 166 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 ARSJQ5FYB0 599 aaPredicted RBP9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 UBE2NLQ5JXB2 153 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 FAM131AQ6UXB0 335 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 GLDNQ6ZMI3 551 aaPredicted RBP9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 SLC35E3Q7Z769 313 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 GVQW1Q8N7I0 195 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 SAMD12Q8N8I0 201 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 DRAXINQ8NBI3 349 aaPredicted RBP9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 S100A16Q96FQ6 103 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 RASL11BQ9BPW5 248 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 HSPB9Q9BQS6 159 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 SDHAF2Q9NX18 166 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 ZNF580Q9UK33 172 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 ANAPC10Q9UM13 185 aa9.26□□□□□ -0.93
HMGXB3-203ENST00000510472 NBR2O15453 112 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 PEX14O75381 377 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 RBBP9O75884 186 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 IGLV2-14P01704 120 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 HLA-DQB1P01920 261 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 IGKV1-16P04430 117 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 IGF1P05019 195 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 CSF1P09603 554 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 RORCP51449 518 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 CFHR3Q02985 330 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 C5orf64Q2M2E5 130 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 STPG2Q8N412 459 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 CHPT1Q8WUD6 406 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 ACOT12Q8WYK0 555 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 GINS4Q9BRT9 223 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 OR2D2Q9H210 308 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 ZNF107Q9UII5 783 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 WASHC3Q9Y3C0 194 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 OR2W1Q9Y3N9 320 aa9.25□□□□□ -0.93
HMGXB3-203ENST00000510472 IGHV7-81A0A0B4J1V7 117 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 PSMB11A5LHX3 300 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 M0R1X1 148 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 AP4M1O00189 453 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 KCNAB3O43448 404 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 APOA1P02647 267 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 EIF4EP06730 217 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 NFYAP23511 347 aaPredicted RBP9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 SOX6P35712 828 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 CBX5P45973 191 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 TAS2R20P59543 309 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 LIN54Q6MZP7 749 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 FOXRED2Q8IWF2 684 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 BEST4Q8NFU0 473 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 DDB2Q92466 427 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 SNAPC3Q92966 411 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 LINC00527Q9UJ94 153 aa9.24□□□□□ -0.93
HMGXB3-203ENST00000510472 IGKV1D-13A0A0B4J2D9 117 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 FCN1O00602 326 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 RRHO14718 337 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 OPN1MWP04001 364 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 OPN1MW2P0DN77 364 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 OPN1MW3P0DN78 364 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 IGKV1-13P0DP09 117 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 ZNF182P17025 639 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 NAT1P18440 290 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 RPL5P46777 297 aaKnown RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 EIF4EBP1Q13541 118 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 PDPNQ86YL7 162 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 RNF152Q8N8N0 203 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 FAM110DQ8TAY7 271 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 FBXL15Q9H469 300 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 COMMD3Q9UBI1 195 aa9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 TSSC4Q9Y5U2 329 aaPredicted RBP9.23□□□□□ -0.93
HMGXB3-203ENST00000510472 TCRBV4S1A1TA0A5B7 111 aa9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 SRRM4A7MD48 611 aaKnown RBP9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 CRYGBP07316 175 aa9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 EGR2P11161 476 aaPredicted RBP9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 ELK1P19419 428 aa9.22□□□□□ -0.93
HMGXB3-203ENST00000510472 LUMP51884 338 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms