RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LINC00527Q9UJ94 153 aa10.13□□□□□ -0.79
HSPG2-213ENST00000498495 GAB2Q9UQC2 676 aa10.13□□□□□ -0.79
HSPG2-213ENST00000498495 AP4M1O00189 453 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 NBR2O15453 112 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 KCNAB3O43448 404 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 SSX5O60225 188 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 PROP1O75360 226 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 OPN1MWP04001 364 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 TFAP2AP05549 437 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 OPN1MW2P0DN77 364 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 OPN1MW3P0DN78 364 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 UBE2NLQ5JXB2 153 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 FAM131AQ6UXB0 335 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 ZNF329Q86UD4 541 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 ANKRD13BQ86YJ7 626 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 STPG2Q8N412 459 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 FAM71E2Q8N5Q1 922 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
HSPG2-213ENST00000498495 OR5AN1Q8NGI8 311 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
HSPG2-213ENST00000498495 GON7Q9BXV9 100 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 WASHC3Q9Y3C0 194 aa10.12□□□□□ -0.79
HSPG2-213ENST00000498495 H0YJW9 148 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 J3QRK9 145 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 M0R1X1 148 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 XRCC3O43542 346 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 CNTFRP26992 372 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 RORCP51449 518 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 GPR107Q5VW38 600 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 LIN54Q6MZP7 749 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 GPR141Q7Z602 305 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 H1FOOQ8IZA3 346 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-213ENST00000498495 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 NPBQ8NG41 125 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 OR4F17Q8NGA8 305 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 R3HDM4Q96D70 268 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 OR4F4Q96R69 305 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 RNF5Q99942 180 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 OR2D2Q9H210 308 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 AUNIPQ9H7T9 357 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 COMMD3Q9UBI1 195 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 ZNF107Q9UII5 783 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-213ENST00000498495 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
HSPG2-213ENST00000498495 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
HSPG2-213ENST00000498495 SMIM31A0A1B0GVY4 71 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 RBBP9O75884 186 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 APOA2P02652 100 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 NFYAP23511 347 aaPredicted RBP10.1□□□□□ -0.79
HSPG2-213ENST00000498495 LINC00205P59089 165 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 RPS16P62249 146 aaKnown RBP10.1□□□□□ -0.79
HSPG2-213ENST00000498495 PLGLAQ15195 96 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 COMMD1Q8N668 190 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 ZNF383Q8NA42 475 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 BEST4Q8NFU0 473 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 HSPB9Q9BQS6 159 aa10.1□□□□□ -0.79
HSPG2-213ENST00000498495 NAA50Q9GZZ1 169 aaKnown RBP10.1□□□□□ -0.79
HSPG2-213ENST00000498495 ADARB2-AS1A8MUL3 147 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 GABARAPO95166 117 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 NDUFA3O95167 84 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 PTHLHP12272 177 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 VDAC1P21796 283 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 CBX5P45973 191 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 ALDH3B2P48448 385 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 LUMP51884 338 aaPredicted RBP10.09□□□□□ -0.79
HSPG2-213ENST00000498495 ARPC4P59998 168 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 CTF1Q16619 201 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 C5orf64Q2M2E5 130 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 TMEM69Q5SWH9 247 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 TEX38Q6PEX7 206 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 HOGA1Q86XE5 327 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 PDPNQ86YL7 162 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 GVQW1Q8N7I0 195 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 ACOT12Q8WYK0 555 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 FLYWCH2Q96CP2 140 aaKnown RBP10.09□□□□□ -0.79
HSPG2-213ENST00000498495 CMTM3Q96MX0 182 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 OR2W1Q9Y3N9 320 aa10.09□□□□□ -0.79
HSPG2-213ENST00000498495 RRHO14718 337 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 HLA-DRB1P01911 266 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 HLA-DQB1P01920 261 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 FCER2P06734 321 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 PF4V1P10720 104 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 THBS3P49746 956 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 TAGLNQ01995 201 aaKnown RBP10.08□□□□□ -0.8
HSPG2-213ENST00000498495 CBX3Q13185 183 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 MZT2AQ6P582 158 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 TSNAXQ99598 290 aaKnown RBP10.08□□□□□ -0.8
HSPG2-213ENST00000498495 OR51J1Q9H342 316 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
HSPG2-213ENST00000498495 IGHV7-81A0A0B4J1V7 117 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 MEIS3P1A6NDR6 274 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 SLC22A5O76082 557 aa10.07□□□□□ -0.8
HSPG2-213ENST00000498495 APOA1P02647 267 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms