RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SAA2P0DJI9 122 aaPredicted RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 MMP9P14780 707 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 CXCL3P19876 107 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 USF1P22415 310 aaPredicted RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 PRTN3P24158 256 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 GPR12P47775 334 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 LCN2P80188 198 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 SLC9A3R2Q15599 337 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 C2orf68Q2NKX9 166 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 Q5PR19 223 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 HCP5Q6MZN7 132 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 FAM71F2Q6NXP2 309 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 C11orf88Q6PI97 169 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 ZNF66Q6ZN08 573 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 ZNF833PQ6ZTB9 187 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 ST6GALNAC6Q969X2 333 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 GPHA2Q96T91 129 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 PHB2Q99623 299 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 TMEM222Q9H0R3 208 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 METTL8Q9H825 291 aaKnown RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 MMP26Q9NRE1 261 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 FAM212BQ9NTI7 297 aaPredicted RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 PIPOXQ9P0Z9 390 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 RBM7Q9Y580 266 aaKnown RBP10.32□□□□□ -0.76
VPS52-220ENST00000493674 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
VPS52-220ENST00000493674 A0A1W2PPE3 182 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 RNF212BA8MTL3 300 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 RAB29O14966 203 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 IGHV3-7P01780 117 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 ANXA3P12429 323 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 S100GP29377 79 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 DUTP33316 252 aaKnown RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 GNG10P50151 68 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 ARF6P62330 175 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 RPL30P62888 115 aaKnown RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 SRSF4Q08170 494 aaKnown RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 LOXL1Q08397 574 aaPredicted RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 LIAT1Q6ZQX7 453 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 TCTEX1D1Q8N7M0 179 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 OR11H6Q8NGC7 330 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 OR5M8Q8NGP6 311 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 LHFPL5Q8TAF8 219 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 CASTOR1Q8WTX7 329 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 DDB2Q92466 427 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 TMEM56Q96MV1 263 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 HSD17B10Q99714 261 aaKnown RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 LIN7CQ9NUP9 197 aaKnown RBP10.31□□□□□ -0.76
VPS52-220ENST00000493674 ZNRD1Q9P1U0 126 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 KCNIP3Q9Y2W7 256 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 INSIG2Q9Y5U4 225 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 TMEM56-RWDD3S4R434 201 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 ABCA1O95477 2261 aa10.31□□□□□ -0.76
VPS52-220ENST00000493674 TNCP24821 2201 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 LINC00473A8K010 186 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 ODF3BA8MYP8 253 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 TNFSF12O43508 249 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 OR2A4O95047 310 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 CDS2O95674 445 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 DVL1P1P54792 670 aaPredicted RBP10.3□□□□□ -0.76
VPS52-220ENST00000493674 SRPXP78539 464 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 PAX8Q06710 450 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 CD300CQ08708 224 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 HLA-DRB5Q30154 266 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 ZNF585BQ52M93 769 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 RPL39P5Q59GN2 51 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 ABHD12Q8N2K0 398 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
VPS52-220ENST00000493674 COQ8AQ8NI60 647 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 IL22RA2Q969J5 263 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 C18orf12Q96KH6 178 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 OR2A7Q96R45 310 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 RAB18Q9NP72 206 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 PRR13Q9NZ81 148 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 MGAT4CQ9UBM8 478 aa10.3□□□□□ -0.76
VPS52-220ENST00000493674 DUXBA0A1W2PPF3 345 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 RBFOX2O43251 390 aaKnown RBP eCLIP10.29□□□□□ -0.76
VPS52-220ENST00000493674 HOXB4P17483 251 aaPredicted RBP10.29□□□□□ -0.76
VPS52-220ENST00000493674 DLX1P56177 255 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 H2BFSP57053 126 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 CATR1Q13166 79 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 SP6Q3SY56 376 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 BTNL3Q6UXE8 466 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 LYG1Q8N1E2 194 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 OR4P4Q8NGL7 312 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 OR51H1Q8NH63 302 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 ASB13Q8WXK3 278 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 TBX15Q96SF7 602 aa10.29□□□□□ -0.76
VPS52-220ENST00000493674 RNASEK-C17orf49H0YIS7 233 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
VPS52-220ENST00000493674 M0R1X1 148 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms