RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 TMEM56Q96MV1 263 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 TP53RKQ96S44 253 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
VPS26A-205ENST00000489656 ZNF251Q9BRH9 671 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 TMEM222Q9H0R3 208 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 METTL8Q9H825 291 aaKnown RBP11.57□□□□□ -0.56
VPS26A-205ENST00000489656 ONECUT1Q9UBC0 465 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 MGAT4CQ9UBM8 478 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
VPS26A-205ENST00000489656 A0A096LNT2 108 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 FAM157AC9JC47 383 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 TNFSF12O43508 249 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 PROP1O75360 226 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 USF1P22415 310 aaPredicted RBP11.56□□□□□ -0.56
VPS26A-205ENST00000489656 PRTN3P24158 256 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 GNG10P50151 68 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 LCN2P80188 198 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 CATR1Q13166 79 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 BEND2Q8NDZ0 799 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 OR5M8Q8NGP6 311 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 IL22RA2Q969J5 263 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 RAB18Q9NP72 206 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 UNC79Q9P2D8 2635 aa11.56□□□□□ -0.56
VPS26A-205ENST00000489656 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 IGHV2-26A0A0B4J1V2 119 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 A0A1W2PPE3 182 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 DUXBA0A1W2PPF3 345 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 OR2A4O95047 310 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 CDS2O95674 445 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 IGLV1-47P01700 117 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-205ENST00000489656 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
VPS26A-205ENST00000489656 ARF6P62330 175 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 SRSF4Q08170 494 aaKnown RBP11.55□□□□□ -0.56
VPS26A-205ENST00000489656 C2orf68Q2NKX9 166 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 ZNF833PQ6ZTB9 187 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 TCTE3Q8IZS6 198 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 LGI3Q8N145 548 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 LYG1Q8N1E2 194 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 ABHD12Q8N2K0 398 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 UXS1Q8NBZ7 420 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 GPHA2Q96T91 129 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 S1PR3Q99500 378 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 CLEC7AQ9BXN2 247 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 ZNF436Q9C0F3 470 aaPredicted RBP11.55□□□□□ -0.56
VPS26A-205ENST00000489656 SIRPDQ9H106 197 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 PDZD2O15018 2839 aa11.55□□□□□ -0.56
VPS26A-205ENST00000489656 CSMD2Q7Z408 3487 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 GOSR2O14653 212 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-205ENST00000489656 RPA2P15927 270 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 PRRX1P54821 245 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 RPL30P62888 115 aaKnown RBP11.54□□□□□ -0.56
VPS26A-205ENST00000489656 CD83Q01151 205 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 LOXL1Q08397 574 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-205ENST00000489656 SP6Q3SY56 376 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 Q5PR19 223 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 LIN54Q6MZP7 749 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 BTNL3Q6UXE8 466 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 KRTAP1-3Q8IUG1 177 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 ST6GALNAC6Q969X2 333 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 TMEM186Q96B77 213 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 ADTRPQ96IZ2 230 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 C18orf12Q96KH6 178 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 HEXA-AS1Q9H8Q6 139 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 RANGRFQ9HD47 186 aaPredicted RBP11.54□□□□□ -0.56
VPS26A-205ENST00000489656 MMP26Q9NRE1 261 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 INSIG2Q9Y5U4 225 aa11.54□□□□□ -0.56
VPS26A-205ENST00000489656 LINC00473A8K010 186 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 M0R1X1 148 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 TOR1AO14656 332 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 RBFOX2O43251 390 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS26A-205ENST00000489656 MMP9P14780 707 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 IL3RAP26951 378 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 THBS3P49746 956 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 DVL1P1P54792 670 aaPredicted RBP11.53□□□□□ -0.56
VPS26A-205ENST00000489656 H2BFSP57053 126 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 CD300CQ08708 224 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 HLA-DRB5Q30154 266 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 RPL39P5Q59GN2 51 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
VPS26A-205ENST00000489656 SELENOHQ8IZQ5 122 aaKnown RBP11.53□□□□□ -0.56
VPS26A-205ENST00000489656 OR10X1Q8NGY0 326 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 CD300LFQ8TDQ1 290 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 DDB2Q92466 427 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 TMED3Q9Y3Q3 217 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
VPS26A-205ENST00000489656 ITPR2Q14571 2701 aa11.53□□□□□ -0.56
VPS26A-205ENST00000489656 A8MV72 311 aaPredicted RBP11.52□□□□□ -0.57
VPS26A-205ENST00000489656 ODF3BA8MYP8 253 aa11.52□□□□□ -0.57
VPS26A-205ENST00000489656 SERPINE2P07093 398 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms