RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 A0A0G2JRQ6 117 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 LINC00473A8K010 186 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 OVOL3O00110 214 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 TSC22D2O75157 780 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 DEDDO75618 318 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 CLDN1O95832 211 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 IGHV3-7P01780 117 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 SLC25A6P12236 298 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 DUTP33316 252 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 S100A10P60903 97 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ODF3L1Q8IXM7 274 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 DCUN1D4Q92564 292 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 TIMD4Q96H15 378 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 ARL6Q9H0F7 186 aa7.76□□□□□ -1.17
SF3B1-211ENST00000487698 RALYQ9UKM9 306 aaKnown RBP7.76□□□□□ -1.17
SF3B1-211ENST00000487698 K7EPK0 472 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 GPR37O15354 613 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 RAMP3O60896 148 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 F12P00748 615 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 NFYBP25208 207 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 TLE4Q04727 773 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 TEX261Q6UWH6 196 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 C1orf229Q6ZS94 237 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 SLC25A48Q6ZT89 311 aaKnown RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 RAB1CQ92928 201 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF251Q9BRH9 671 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 MIOXQ9UGB7 285 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 U3KQ87 197 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 SAA2-SAA4A0A096LPE2 208 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 C17orf98A8MV24 154 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 PPIHO43447 177 aaKnown RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 NDUFS7O75251 213 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 PITX3O75364 302 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 P0C879 139 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 SAA2P0DJI9 122 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 LPAR6P43657 344 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 AP2S1P53680 142 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 TMEM33P57088 247 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 ERVFRD-1P60508 538 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 RPL39P5Q59GN2 51 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF767PQ75MW2 155 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 SPAG16Q8N0X2 631 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 PIP4P2Q8N4L2 257 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 C11orf42Q8N5U0 333 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 INO80EQ8NBZ0 244 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 C8orf46Q8TAG6 207 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 TCTEX1D2Q8WW35 142 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 NEIL1Q96FI4 390 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 AQP10Q96PS8 301 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 ZFP57Q9NU63 452 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 RCL1Q9Y2P8 373 aaKnown RBP7.75□□□□□ -1.17
SF3B1-211ENST00000487698 POMT1Q9Y6A1 747 aa7.75□□□□□ -1.17
SF3B1-211ENST00000487698 A0A087X0M5 115 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 A0A1B0GU03 582 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 A0A1B0GX30 115 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 A0A1W2PPE3 182 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 MSGN1A6NI15 193 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 F5H0A9 414 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-211ENST00000487698 RAB29O14966 203 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 ST8SIA3O43173 380 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 KCNAB3O43448 404 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 SCGB1D2O95969 90 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 EFNA4P52798 201 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 LINC00205P59089 165 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 WDR25Q64LD2 544 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-211ENST00000487698 NCR3LG1Q68D85 454 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 THOC7Q6I9Y2 204 aaKnown RBP7.74□□□□□ -1.17
SF3B1-211ENST00000487698 FOXRED2Q8IWF2 684 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 C8orf31Q8N9H6 132 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 OR8B3Q8NGG8 313 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF596Q8TC21 504 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 DDB2Q92466 427 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 OR8B2Q96RD0 313 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 C11orf1Q9H5F2 150 aa7.74□□□□□ -1.17
SF3B1-211ENST00000487698 LSM5Q9Y4Y9 91 aaKnown RBP7.74□□□□□ -1.17
SF3B1-211ENST00000487698 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
SF3B1-211ENST00000487698 KIAA1324LA8MWY0 1029 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 M0R1X1 148 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.173e-10■■□□□ 14.1
SF3B1-211ENST00000487698 BCL2L11O43521 198 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 S1PR2O95136 353 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 CFDP00746 253 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-211ENST00000487698 GNG10P50151 68 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 ID3Q02535 119 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 OR2B11Q5JQS5 317 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 Q6ZRM9 215 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 ZNF680Q8NEM1 530 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 DMBX1Q8NFW5 382 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 OR8H1Q8NGG4 311 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 E5RGE8 158 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 RBP4P02753 201 aa7.73□□□□□ -1.17
SF3B1-211ENST00000487698 RLN2P04090 185 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms