RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 BUB3O43684 328 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CRTAPO75718 401 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 MMP23AO75900 390 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 OR7C1O76099 320 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CGB3P0DN86 165 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CGB7P0DN87 165 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC2A2P11168 524 aaPredicted RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 MGMTP16455 207 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CCL3L1P16619 93 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 RAB3BP20337 219 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 ERP29P30040 261 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SDC2P34741 201 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 ALDH3B2P48448 385 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 PSMD7P51665 324 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 BMXP51813 675 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 DLX6P56179 175 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 EDDM3BP56851 147 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 LSM3P62310 102 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CX3CL1P78423 397 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 GPR176Q14439 515 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 EDDM3AQ14507 147 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 GRK1Q15835 563 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 HES5Q5TA89 166 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 HCP5Q6MZN7 132 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 FIP1L1Q6UN15 594 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 GDPD3Q7L5L3 318 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 VMO1Q7Z5L0 202 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 RTN4RL2Q86UN3 420 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SUMF2Q8NBJ7 301 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 CHST4Q8NCG5 386 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 OR6M1Q8NGM8 313 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 OR13F1Q8NGS4 319 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 C22orf15Q8WYQ4 148 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 TNFRSF14Q92956 283 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM46BQ96A09 425 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM3DQ96BQ1 224 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 MRPS24Q96EL2 167 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 COQ2Q96H96 371 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 NICN1Q9BSH3 213 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 FUNDC2Q9BWH2 189 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 SELENOIQ9C0D9 397 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 NAA50Q9GZZ1 169 aaKnown RBP4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 PLGRKTQ9HBL7 147 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 ONECUT1Q9UBC0 465 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 KPTNQ9Y664 436 aa4.98□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAV39A0A0B4J263 110 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 RNASEK-C17orf49H0YIS7 233 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PDCD5O14737 125 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 SOCS1O15524 211 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 CSN2P05814 226 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM157CP0CG43 387 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 UBBP0CG47 229 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 FUT3P21217 361 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PRTN3P24158 256 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 MYL9P24844 172 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 SRP14P37108 136 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 EFNB2P52799 333 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 TMEM50BP56557 158 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 RPS27AP62979 156 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 MXD1Q05195 221 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 MEF2CQ06413 473 aaPredicted RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 ATXN7L3Q14CW9 347 aaPredicted RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 RAB11BQ15907 218 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 MPV17LQ2QL34 196 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PAN3Q58A45 887 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 UTF1Q5T230 341 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 ATAD3CQ5T2N8 411 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 METTL11BQ5VVY1 283 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 RSBN1Q5VWQ0 802 aaPredicted RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 RUSC1-AS1Q66K80 236 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PET117Q6UWS5 81 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 BAIAP2L2Q6UXY1 529 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 BRD3OSQ6XYD6 125 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 GDPGP1Q6ZNW5 385 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 C9orf139Q6ZV77 190 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 C5orf24Q7Z6I8 188 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 TPRA1Q86W33 373 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PDZD9Q8IXQ8 264 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 OR8H3Q8N146 312 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PNKDQ8N490 385 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 FAM89BQ8N5H3 189 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 SLC24A4Q8NFF2 622 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 KCNG3Q8TAE7 436 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 CCDC107Q8WV48 283 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 DYRK2Q92630 601 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 CORO2AQ92828 525 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 LHX4Q969G2 390 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 KCTD7Q96MP8 289 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 TM2D1Q9BX74 207 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 MRPS26Q9BYN8 205 aaKnown RBP4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 BARHL1Q9BZE3 327 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 LPAR5Q9H1C0 372 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 SIRT7Q9NRC8 400 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 NUP50Q9UKX7 468 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 PEX16Q9Y5Y5 336 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 KIAA2026Q5HYC2 2103 aa4.97□□□□□ -1.61
RTFDC1-209ENST00000487211 TRAV34A0A0B4J273 112 aa4.96□□□□□ -1.62
RTFDC1-209ENST00000487211 TRAV40A0A0B4J280 105 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms