RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 IGKV1D-8A0A087WSZ0 117 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 FAM90A9PA6NNJ1 464 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 M0QZK8 103 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 M0R1X1 148 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 HPGDSO60760 199 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 TMEM127O75204 238 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 MOSP00540 346 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 EIF4EP06730 217 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 OR8U9P0C7N5 309 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 CD1BP29016 333 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 SOX6P35712 828 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 ZNF137PP52743 207 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 PROK1P58294 105 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 LSAMPQ13449 338 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 MMDQ15546 238 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 CTF1Q16619 201 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 FAM131AQ6UXB0 335 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 THNSL2Q86YJ6 484 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 OR8U1Q8NH10 309 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 ST6GALNAC6Q969X2 333 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 NABP2Q9BQ15 211 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 CABLES2Q9BTV7 478 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 OR2D2Q9H210 308 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.97□□□□□ -1.136e-7■■■■□ 21.5
SPTLC1-206ENST00000482632 PKD1L1Q8TDX9 2849 aa7.97□□□□□ -1.13
SPTLC1-206ENST00000482632 A0A0A6YYH2 397 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 A6NJ64 397 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 RGS5O15539 181 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 XRCC3O43542 346 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 SSX5O60225 188 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 NFYAP23511 347 aaPredicted RBP7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 RPL5P46777 297 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 TAS2R20P59543 309 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 KRTAP10-3P60369 221 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 SPCS2Q15005 226 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 PLGLAQ15195 96 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 RNASE12Q5GAN4 147 aaKnown RBP7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 KHDC1LQ5JSQ8 128 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 LY6G6FQ5SQ64 297 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 ZNF833PQ6ZTB9 187 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 CENPVQ7Z7K6 275 aaPredicted RBP7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 SNX29P2Q8IUI4 249 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 GVQW1Q8N7I0 195 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 C5orf56Q8N8D9 126 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 DRAXINQ8NBI3 349 aaPredicted RBP7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 BEST4Q8NFU0 473 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 ACOT12Q8WYK0 555 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 AP3S1Q92572 193 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 RASL11BQ9BPW5 248 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 ZNF251Q9BRH9 671 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 ABCG5Q9H222 651 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 AUNIPQ9H7T9 357 aa7.96□□□□□ -1.14
SPTLC1-206ENST00000482632 TRBV6-7A0A0A0MS04 114 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 APOA2P02652 100 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 ZNF182P17025 639 aaPredicted RBP7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 CBX5P45973 191 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 NSUN5P1Q3KNT7 163 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 C11orf88Q6PI97 169 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 SLC35E3Q7Z769 313 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 SGMS2Q8NHU3 365 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 RAB2BQ8WUD1 216 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 ANAPC16Q96DE5 110 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 SERTAD4Q9NUC0 356 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 KIAA1456Q9P272 454 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 LINC00527Q9UJ94 153 aa7.95□□□□□ -1.14
SPTLC1-206ENST00000482632 A0A1W2PRX2 142 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 M0QZ24 198 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 ITGB1BP1O14713 200 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 FGF16O43320 207 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 KCNAB3O43448 404 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 APOA1P02647 267 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 AMY1AP04745 511 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 AMY2AP04746 511 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CTXN2P0C2S0 81 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CT45A6P0DMU7 189 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CT45A5P0DMU8 189 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CT45A7P0DMV0 189 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 ELK1P19419 428 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CNTFRP26992 372 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 PRSS3P35030 304 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 LUMP51884 338 aaPredicted RBP7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 F2RL1P55085 397 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 FXYD4P59646 89 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 ACTBP60709 375 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 RPS16P62249 146 aaKnown RBP7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CBX3Q13185 183 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 SRSF7Q16629 238 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 FAM71F2Q6NXP2 309 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CNIH2Q6PI25 160 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 Q6ZS49 121 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 H1FOOQ8IZA3 346 aaPredicted RBP7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 Q8N2B8 174 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 CITED1Q99966 193 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 GHITMQ9H3K2 345 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 SLC35D1Q9NTN3 355 aa7.94□□□□□ -1.14
SPTLC1-206ENST00000482632 NECAP2Q9NVZ3 263 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms