RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ELF5Q9UKW6 265 aaPredicted RBP9.85□□□□□ -0.83
CLCNKA-205ENST00000477360 SAA2-SAA4A0A096LPE2 208 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 KCNAB3O43448 404 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 RBBP9O75884 186 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 SCTP09683 121 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 SAA2P0DJI9 122 aaPredicted RBP9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 NAT1P18440 290 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 CEACAM6P40199 344 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 VDAC2P45880 294 aaPredicted RBP9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 TAGLNQ01995 201 aaKnown RBP9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 SSBP1Q04837 148 aaKnown RBP9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 HES1Q14469 280 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 HOGA1Q86XE5 327 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 KLHDC1Q8N7A1 406 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 C5orf56Q8N8D9 126 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 OR10J5Q8NHC4 309 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 TAF15Q92804 592 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 ZNF251Q9BRH9 671 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 V9GYH0 126 aa9.84□□□□□ -0.83
CLCNKA-205ENST00000477360 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 IGKV1-6A0A0C4DH72 117 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 FABP12A6NFH5 140 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 GABARAPH6UMI1 98 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 GSTZ1O43708 216 aaPredicted RBP9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 PEX14O75381 377 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 SLC22A5O76082 557 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 IGHG2P01859 326 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 CD24P25063 80 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 KRTAP10-3P60369 221 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 C2orf68Q2NKX9 166 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 ABCA11PQ4W5N1 156 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 SPANXN2Q5MJ10 180 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 SMIM4Q8WVI0 70 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 NABP2Q9BQ15 211 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 GON7Q9BXV9 100 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 C11orf54Q9H0W9 315 aaPredicted RBP9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 PLSCR3Q9NRY6 295 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 RDH8Q9NYR8 311 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 ZNF107Q9UII5 783 aaPredicted RBP9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 ZNF221Q9UK13 617 aa9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 MRPS7Q9Y2R9 242 aaKnown RBP9.83□□□□□ -0.84
CLCNKA-205ENST00000477360 PTHLHP12272 177 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 REG1BP48304 166 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 ACTBP60709 375 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 ZNF45Q02386 682 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 IL18Q14116 193 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 FAM53AQ6NSI3 398 aaPredicted RBP9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 FAM71E2Q8N5Q1 922 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 COMMD1Q8N668 190 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 BEST4Q8NFU0 473 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 OR5AN1Q8NGI8 311 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 CHPT1Q8WUD6 406 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 OR1A1Q9P1Q5 309 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 MTFP1Q9UDX5 166 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 SIGLEC9Q9Y336 463 aa9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 RBMX2Q9Y388 322 aaKnown RBP9.82□□□□□ -0.84
CLCNKA-205ENST00000477360 GSTT2P0CG29 244 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 GSTT2BP0CG30 244 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 SLC6A1P30531 599 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 RCVRNP35243 200 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 MSMO1Q15800 293 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 ZNF79Q15937 498 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 ARSJQ5FYB0 599 aaPredicted RBP9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 FAM131AQ6UXB0 335 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 NDUFA11Q86Y39 141 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 FOXRED2Q8IWF2 684 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 H1FOOQ8IZA3 346 aaPredicted RBP9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 Q8N9W7 124 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 NPBQ8NG41 125 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 S100ZQ8WXG8 99 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 AKIP1Q9NQ31 210 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 ANXA10Q9UJ72 324 aa9.81□□□□□ -0.84
CLCNKA-205ENST00000477360 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 IGKV1D-8A0A087WSZ0 117 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 AP4M1O00189 453 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 FBXO24O75426 580 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OPN1MWP04001 364 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 CT45A6P0DMU7 189 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 CT45A5P0DMU8 189 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 CT45A7P0DMV0 189 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OPN1MW2P0DN77 364 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OPN1MW3P0DN78 364 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 VSIG10L2P0DP72 767 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 GPR12P47775 334 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OR3A3P47888 321 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 CD83Q01151 205 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 FBLN7Q53RD9 439 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 IGSF11Q5DX21 431 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 TREML4Q6UXN2 200 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 Q6ZS46 218 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 SLC35E3Q7Z769 313 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 PDPNQ86YL7 162 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 MFSD4AQ8N468 514 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 GVQW1Q8N7I0 195 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 GDPD1Q8N9F7 314 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OR5AP2Q8NGF4 316 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 OR52I2Q8NH67 350 aa9.8□□□□□ -0.84
CLCNKA-205ENST00000477360 FCAMRQ8WWV6 532 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms