RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OR4F17Q8NGA8 305 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 WIPF2Q8TF74 440 aaPredicted RBP11.26□□□□□ -0.61
VAMP4-203ENST00000474047 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 SLC25A38Q96DW6 304 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 OR4F4Q96R69 305 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 GON7Q9BXV9 100 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 MRPS26Q9BYN8 205 aaKnown RBP11.26□□□□□ -0.61
VAMP4-203ENST00000474047 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 WASHC3Q9Y3C0 194 aa11.26□□□□□ -0.61
VAMP4-203ENST00000474047 M0R1X1 148 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 NBR2O15453 112 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 TFAP2AP05549 437 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 NCS1P62166 190 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 PLGLAQ15195 96 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
VAMP4-203ENST00000474047 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-203ENST00000474047 ZNF107Q9UII5 783 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-203ENST00000474047 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-203ENST00000474047 APOA2P02652 100 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 SMIM18P0DKX4 95 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 CD83Q01151 205 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 UBE2NLQ5JXB2 153 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 C10orf99Q6UWK7 81 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 STPG2Q8N412 459 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 SLC25A46Q96AG3 418 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 RITA1Q96K30 269 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 TOLLIPQ9H0E2 274 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 WNK1Q9H4A3 2382 aa11.24□□□□□ -0.61
VAMP4-203ENST00000474047 IGKV1D-8A0A087WSZ0 117 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 H0YJW9 148 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 J3QRK9 145 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 RBBP9O75884 186 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 PF4V1P10720 104 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 CNTFRP26992 372 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 ARPC4P59998 168 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 CBX3Q13185 183 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 CNIH2Q6PI25 160 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
VAMP4-203ENST00000474047 MGAM2Q2M2H8 2515 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 SSX5O60225 188 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 VDAC1P21796 283 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 RPS16P62249 146 aaKnown RBP11.23□□□□□ -0.61
VAMP4-203ENST00000474047 GPR107Q5VW38 600 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 H1FOOQ8IZA3 346 aaPredicted RBP11.23□□□□□ -0.61
VAMP4-203ENST00000474047 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 OR5AN1Q8NGI8 311 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 COMMD3Q9UBI1 195 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
VAMP4-203ENST00000474047 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 XRCC3O43542 346 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 RORCP51449 518 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 LUMP51884 338 aaPredicted RBP11.22□□□□□ -0.61
VAMP4-203ENST00000474047 C5orf64Q2M2E5 130 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 TMEM69Q5SWH9 247 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 BEST4Q8NFU0 473 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 NPBQ8NG41 125 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
VAMP4-203ENST00000474047 TSNAXQ99598 290 aaKnown RBP11.22□□□□□ -0.61
VAMP4-203ENST00000474047 RNF5Q99942 180 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 HSPB9Q9BQS6 159 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 IFT46Q9NQC8 304 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 SLC35D1Q9NTN3 355 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 SDHAF2Q9NX18 166 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 GAB2Q9UQC2 676 aa11.22□□□□□ -0.61
VAMP4-203ENST00000474047 FCER2P06734 321 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
VAMP4-203ENST00000474047 CBX5P45973 191 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 TEX38Q6PEX7 206 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 PDPNQ86YL7 162 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 OR2W1Q9Y3N9 320 aa11.21□□□□□ -0.61
VAMP4-203ENST00000474047 PKD1L1Q8TDX9 2849 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 NUDT19A8MXV4 375 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 RRHO14718 337 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 PROP1O75360 226 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 PF4P02776 101 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 OR5H8P0DN80 308 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 THBS3P49746 956 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 LINC00205P59089 165 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 TAGLNQ01995 201 aaKnown RBP11.21□□□□□ -0.62
VAMP4-203ENST00000474047 RTL8BQ17RB0 113 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 MZT2AQ6P582 158 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 ABHD5Q8WTS1 349 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 NAA50Q9GZZ1 169 aaKnown RBP11.21□□□□□ -0.62
VAMP4-203ENST00000474047 FBXL15Q9H469 300 aa11.21□□□□□ -0.62
VAMP4-203ENST00000474047 MEIS3P1A6NDR6 274 aa11.2□□□□□ -0.62
VAMP4-203ENST00000474047 ADARB2-AS1A8MUL3 147 aa11.2□□□□□ -0.62
VAMP4-203ENST00000474047 SLC22A5O76082 557 aa11.2□□□□□ -0.62
VAMP4-203ENST00000474047 NDUFA3O95167 84 aa11.2□□□□□ -0.62
VAMP4-203ENST00000474047 HLA-DRB1P01911 266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms