RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 CSDC2Q9Y534 153 aaKnown RBP3.21□□□□□ -1.9
HMGB1-207ENST00000468384 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 A0A0A6YYD4 124 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 A0A1B0GUV1 79 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 FAM172BPA6NC97 362 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 ZNF850A8MQ14 1090 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 K7N7A8 449 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 DYNC1I1O14576 645 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 CDIPTO14735 213 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 TNFSF12O43508 249 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 SLC2A10O95528 541 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 TRBV12-3P01733 135 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 APOA1P02647 267 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 AQP1P29972 269 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 RAB11AP62491 216 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 GPR176Q14439 515 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 RAB11BQ15907 218 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 UNC50Q53HI1 259 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 FFAR4Q5NUL3 377 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 C10orf128Q5T292 105 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 CD200R1LQ6Q8B3 271 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 SLC35D2Q76EJ3 337 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 CADM2Q8N3J6 435 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 FAM86B1Q8N7N1 296 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 OR10V1Q8NGI7 309 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 CDC26Q8NHZ8 85 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 FBXO25Q8TCJ0 367 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 PELI1Q96FA3 418 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 MCHR1Q99705 422 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 DERL2Q9GZP9 239 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 STX18Q9P2W9 335 aaKnown RBP3.2□□□□□ -1.9
HMGB1-207ENST00000468384 VPS29Q9UBQ0 182 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 RPH3ALQ9UNE2 315 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 COPS3Q9UNS2 423 aa3.2□□□□□ -1.9
HMGB1-207ENST00000468384 A0A087X0T9 212 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 TRAPPC13A5PLN9 417 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 C15orf61A6NNL5 157 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 CD300LBA8K4G0 201 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 MMP23AO75900 390 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 FAM228BP0C875 321 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 SPART-AS1P0CW21 52 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ADORA3P0DMS8 318 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ANXA3P12429 323 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 BGNP21810 368 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 OPRL1P41146 370 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ZNF133P52736 654 aaPredicted RBP3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ERVK11-1P61568 191 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 GK3PQ14409 553 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 CLINT1Q14677 625 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ECSCRQ19T08 205 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 FAM71E1Q6IPT2 247 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 ATRAIDQ6UW56 229 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 MICU2Q8IYU8 434 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 CLEC4FQ8N1N0 589 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 Q8N814 137 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 OR4C5Q8NGB2 326 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 OR4A15Q8NGL6 344 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 OR4D5Q8NGN0 318 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 LRRC20Q8TCA0 184 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 SPACA5Q96QH8 159 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 OR7D2Q96RA2 312 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 UPK3BQ9BT76 320 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 C20orf24Q9BUV8 137 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 PRRG3Q9BZD7 231 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 MTHFD2LQ9H903 347 aaPredicted RBP3.19□□□□□ -1.9
HMGB1-207ENST00000468384 Q9HAA7 133 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 IL1RAPQ9NPH3 570 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 CHMP5Q9NZZ3 219 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 GNG12Q9UBI6 72 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 CD300AQ9UGN4 299 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 MLXQ9UH92 298 aa3.19□□□□□ -1.9
HMGB1-207ENST00000468384 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 FAM74A7A6NL05 159 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 PLPP3O14495 311 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 TOR1AO14656 332 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 EI24O14681 340 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 SGCEO43556 437 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 SCGNO76038 276 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 TRGV3P03979 118 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 GLAP06280 429 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 PRSS1P07477 247 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 KRT16P08779 473 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 T-ENOLP0DO92 83 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 CRYGAP11844 174 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 BLVRBP30043 206 aaPredicted RBP3.18□□□□□ -1.9
HMGB1-207ENST00000468384 ATP1B3P54709 279 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 DHODHQ02127 395 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 ENDOGQ14249 297 aaKnown RBP3.18□□□□□ -1.9
HMGB1-207ENST00000468384 MRPL23Q16540 153 aaKnown RBP3.18□□□□□ -1.9
HMGB1-207ENST00000468384 FAM74A3Q4VXF1 159 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 ZNF585BQ52M93 769 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 C6orf183Q5T699 404 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 Q6ZRP5 223 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 PGAP1Q75T13 922 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 APRG1Q8IVJ8 170 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 FNDC5Q8NAU1 212 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 OR5D16Q8NGK9 328 aa3.18□□□□□ -1.9
HMGB1-207ENST00000468384 OR10Z1Q8NGY1 313 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms