RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 GINS4Q9BRT9 223 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 LIN7CQ9NUP9 197 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 ZMAT5Q9UDW3 170 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 RBM7Q9Y580 266 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
CCHCR1-211ENST00000467553 IGKV1D-8A0A087WSZ0 117 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 TRBV6-7A0A0A0MS04 114 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 H7C2Y5 167 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 IGHG2P01859 326 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 IGLL1P15814 213 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 CNTFRP26992 372 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 GPR12P47775 334 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 SCAND1P57086 179 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 ACTBP60709 375 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 PITPNAQ00169 270 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 DCTN2Q13561 401 aaKnown RBP11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 MMDQ15546 238 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 CROCCP3Q8IVE0 287 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 COMMD1Q8N668 190 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 OR8U1Q8NH10 309 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 CHPT1Q8WUD6 406 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 ABCG5Q9H222 651 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 DIABLOQ9NR28 239 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 SPATA2Q9UM82 520 aa11.09□□□□□ -0.63
CCHCR1-211ENST00000467553 J3QRK9 145 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 SMIM18P0DKX4 95 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 DTYMKP23919 212 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 LINC00205P59089 165 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 VBP1P61758 197 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 NCS1P62166 190 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 PNLIPRP3Q17RR3 467 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 DPF1Q92782 380 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 DCSTAMPQ9H295 470 aa11.08□□□□□ -0.64
CCHCR1-211ENST00000467553 SSX5O60225 188 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 TMEM127O75204 238 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 PROP1O75360 226 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 MC5RP33032 325 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 SOX6P35712 828 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 SLC35B1P78383 322 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 EGFEM1PQ0D2K5 195 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 Q6ZS49 121 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 STPG2Q8N412 459 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 FAM71E2Q8N5Q1 922 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 OR13F1Q8NGS4 319 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 S100A16Q96FQ6 103 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 OR2D2Q9H210 308 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 KIAA1456Q9P272 454 aa11.07□□□□□ -0.64
CCHCR1-211ENST00000467553 OR5H14A6NHG9 310 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 H0YJW9 148 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 M0R1X1 148 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 AP4M1O00189 453 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 NBR2O15453 112 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 TFAP2AP05549 437 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 HSPB9Q9BQS6 159 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 GON7Q9BXV9 100 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
CCHCR1-211ENST00000467553 A0A0A6YYH2 397 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 A6NJ64 397 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 DIRAS3O95661 229 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 FCER2P06734 321 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 CTXN2P0C2S0 81 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 PTHLHP12272 177 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 RPS16P62249 146 aaKnown RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 COL7A1Q02388 2944 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 PLGLAQ15195 96 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 GPR107Q5VW38 600 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 LIN54Q6MZP7 749 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 CNIH2Q6PI25 160 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 ZNF383Q8NA42 475 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 OR5AN1Q8NGI8 311 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 MRPS26Q9BYN8 205 aaKnown RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 NAA50Q9GZZ1 169 aaKnown RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 FBXL15Q9H469 300 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 AUNIPQ9H7T9 357 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 SDHAF2Q9NX18 166 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 COMMD3Q9UBI1 195 aa11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 ZNF107Q9UII5 783 aaPredicted RBP11.05□□□□□ -0.64
CCHCR1-211ENST00000467553 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms