RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 PSG4Q00888 419 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 PRB3Q04118 309 aaPredicted RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 MADCAM1Q13477 382 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 OR8B8Q15620 311 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 KCNJ8Q15842 424 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SGCAQ16586 387 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 RFX4Q33E94 735 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 LIN52Q52LA3 116 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 PRAMEF5Q5TYX0 476 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 PRAMEF6Q5VXH4 476 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 C5orf46Q6UWT4 87 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 ZYG11AQ6WRX3 759 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 ZNF836Q6ZNA1 936 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 COMTD1Q86VU5 262 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 CALHM3Q86XJ0 350 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 LRRC34Q8IZ02 419 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 OR5AS1Q8N127 324 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 CCDC54Q8NEL0 328 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 WFDC9Q8NEX5 89 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 OR10AD1Q8NGE0 317 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 OR1N2Q8NGR9 330 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 OR2G2Q8NGZ5 317 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 TWIST2Q8WVJ9 160 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 TUBGCP3Q96CW5 907 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 CMBLQ96DG6 245 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SLC25A44Q96H78 314 aaPredicted RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 PPP3R2Q96LZ3 170 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 TRNT1Q96Q11 434 aaKnown RBP1.89□□□□□ -2.11
XRN1-206ENST00000467077 TMEM59Q9BXS4 323 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 GPR61Q9BZJ8 451 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SLC38A1Q9H2H9 487 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 ARMC7Q9H6L4 198 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SIRT7Q9NRC8 400 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 INPP5EQ9NRR6 644 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 SAR1BQ9Y6B6 198 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 STARD9Q9P2P6 4700 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
XRN1-206ENST00000467077 IGKV1D-42A0A075B6H8 117 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 A0A096LNJ9 63 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 IGKV1D-13A0A0B4J2D9 117 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 A0A1B0GW55 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 TCRBV4S1A1TA0A5B7 111 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 F5H5P2 479 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 RNF13O43567 381 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 FSTL3O95633 263 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 BGLAPP02818 100 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 HLA-DPB1P04440 258 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 BCHEP06276 602 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 SNRPAP09012 282 aaKnown RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L2P0CJ85 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L3P0CJ86 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L5P0CJ88 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L6P0CJ89 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L7P0CJ90 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PGA4P0DJD7 388 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PGA3P0DJD8 388 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 IGKV1-13P0DP09 117 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 KITLGP21583 273 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PAX6P26367 422 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 GUCA1AP43080 201 aaPredicted RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 RGS6P49758 472 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 CLDN8P56748 225 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DNAJB13P59910 316 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 ACTR3P61158 418 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 NCALDP61601 193 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 GNG11P61952 73 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 ECH1Q13011 328 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 KLRD1Q13241 179 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 AQP6Q13520 282 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 GUCA2BQ16661 112 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 TMEM183BQ1AE95 376 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 RSPO1Q2MKA7 263 aaPredicted RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 KCTD21Q4G0X4 260 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 ULK3Q6PHR2 472 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4L9Q6RFH8 374 aaPredicted RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 SLC25A48Q6ZT89 311 aaKnown RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 CCDC121Q6ZUS5 278 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 SLC35D2Q76EJ3 337 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 RIMKLAQ8IXN7 391 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 TMEM183AQ8IXX5 376 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PUSL1Q8N0Z8 303 aaKnown RBP1.88□□□□□ -2.11
XRN1-206ENST00000467077 C10orf111Q8N326 155 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 OR11L1Q8NGX0 322 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 OR13G1Q8NGZ3 307 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 OR5J2Q8NH18 312 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 SLC7A13Q8TCU3 470 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 C10orf82Q8WW14 230 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 RORBQ92753 470 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 SGK3Q96BR1 496 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 CCDC115Q96NT0 180 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PANX1Q96RD7 426 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 OR2H1Q9GZK4 316 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DNTTIP1Q9H147 329 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 SLCO1B3Q9NPD5 702 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 TMEM100Q9NV29 134 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 PTTG3PQ9NZH4 202 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 DUX4Q9UBX2 424 aa1.88□□□□□ -2.11
XRN1-206ENST00000467077 ZMAT5Q9UDW3 170 aaKnown RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 355.1 ms