RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SLC2A2P11168 524 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-207ENST00000461798 CEACAM6P40199 344 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 HSPA13P48723 471 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 VEGFCP49767 419 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 RAB9AP51151 201 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 HLA-DRB3P79483 266 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 TBCEQ15813 527 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-207ENST00000461798 DEFB136Q30KP8 78 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 RPL39P5Q59GN2 51 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 PLAC9Q5JTB6 97 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 C9orf66Q5T8R8 295 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 CD200R1LQ6Q8B3 271 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 OR56B1Q8NGI3 324 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 ARHGAP5-AS1Q96IT6 56 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 ABHD14BQ96IU4 210 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 B9D2Q9BPU9 175 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 HDHD3Q9BSH5 251 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-207ENST00000461798 PECRQ9BY49 303 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 PARP12Q9H0J9 701 aaKnown RBP7.13□□□□□ -1.27
BRCA1-207ENST00000461798 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 C12orf4Q9NQ89 552 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 KIAA1456Q9P272 454 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 SCOCQ9UIL1 159 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 RAB22AQ9UL26 194 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 GAB2Q9UQC2 676 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 VSIG4Q9Y279 399 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 NUBP2Q9Y5Y2 271 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 WSB1Q9Y6I7 421 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 V9GY05 133 aa7.13□□□□□ -1.27
BRCA1-207ENST00000461798 IGKV1-6A0A0C4DH72 117 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 ERICH4A6NGS2 130 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 TRDCB7Z8K6 153 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 DENRO43583 198 aaKnown RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 MRPS14O60783 128 aaKnown RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 DIRAS3O95661 229 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 EGR2P11161 476 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 GALP22466 123 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 CALRP27797 417 aaKnown RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 MAP2K4P45985 399 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 SERPINB10P48595 397 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 CX3CL1P78423 397 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 SSX1Q16384 188 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 TMEM65Q6PI78 240 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 FAM131AQ6UXB0 335 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF367Q7RTV3 350 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 TCTEX1D1Q8N7M0 179 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 OR11H1Q8NG94 326 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 SETD6Q8TBK2 473 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 CMSS1Q9BQ75 279 aaKnown RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 CCDC90BQ9GZT6 254 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 PARP11Q9NR21 331 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 OR1A1Q9P1Q5 309 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 KCNK7Q9Y2U2 307 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 WASHC3Q9Y3C0 194 aa7.12□□□□□ -1.27
BRCA1-207ENST00000461798 LSM4Q9Y4Z0 139 aaKnown RBP7.12□□□□□ -1.27
BRCA1-207ENST00000461798 TMEM272A0A1B0GTI8 110 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 TRDV1A0A1B0GX56 115 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 FCN1O00602 326 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 PDCD5O14737 125 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 HSPA12AO43301 675 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 SOX15O60248 233 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
BRCA1-207ENST00000461798 INSL3P51460 131 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 LUMP51884 338 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-207ENST00000461798 CLDN12P56749 244 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 NDPQ00604 133 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 TMEM267Q0VDI3 215 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-207ENST00000461798 PSG5Q15238 335 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 AKIRIN2Q53H80 203 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 ASPHD1Q5U4P2 390 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 IZUMO2Q6UXV1 221 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF562Q6V9R5 426 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 GLDNQ6ZMI3 551 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-207ENST00000461798 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.11□□□□□ -1.27
BRCA1-207ENST00000461798 OR4A4PQ8NGN8 299 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 FBXL15Q9H469 300 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 GNB4Q9HAV0 340 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 BLOC1S6Q9UL45 172 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 RNF150Q9ULK6 438 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 RAB26Q9ULW5 256 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 FBXO7Q9Y3I1 522 aa7.11□□□□□ -1.27
BRCA1-207ENST00000461798 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 TRBV6-7A0A0A0MS04 114 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 SHISA3A0PJX4 238 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 IFITM5A6NNB3 132 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 H7C2Y5 167 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 RAB27BO00194 218 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 FABP7O15540 132 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 SPDEFO95238 335 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 TFAP2AP05549 437 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 OR8U8P0C7N1 319 aa7.1□□□□□ -1.27
BRCA1-207ENST00000461798 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-207ENST00000461798 RAB6AP20340 208 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms