RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SLC35E3Q7Z769 313 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 FOXRED2Q8IWF2 684 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 H1FOOQ8IZA3 346 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 OR5AU1Q8NGC0 362 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 AP3S1Q92572 193 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 CMTM3Q96MX0 182 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 IFT46Q9NQC8 304 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 PLSCR3Q9NRY6 295 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 LIN7CQ9NUP9 197 aaKnown RBP8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 KIAA1456Q9P272 454 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 ANXA10Q9UJ72 324 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 WASHC3Q9Y3C0 194 aa8.4□□□□□ -1.06
TRAPPC12-213ENST00000461577 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 FAM25AB3EWG3 89 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 FAM25CB3EWG5 89 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 FAM25GB3EWG6 89 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 H0YJW9 148 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 J3QRK9 145 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 KCNAB3O43448 404 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 IGHG2P01859 326 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 APOA1P02647 267 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 APOA2P02652 100 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 EIF4EP06730 217 aaKnown RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 CSF1P09603 554 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 PTHLHP12272 177 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 ZNF182P17025 639 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 NFYAP23511 347 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 RPL5P46777 297 aaKnown RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 NSUN5P1Q3KNT7 163 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 HIST2H2BDQ6DRA6 164 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 HOGA1Q86XE5 327 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 GVQW1Q8N7I0 195 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 DRAXINQ8NBI3 349 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 BEST4Q8NFU0 473 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 OR4X2Q8NGF9 303 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 CHPT1Q8WUD6 406 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 SDHAF2Q9NX18 166 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 GAB2Q9UQC2 676 aa8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 MRPS7Q9Y2R9 242 aaKnown RBP8.39□□□□□ -1.07
TRAPPC12-213ENST00000461577 MEIS3P1A6NDR6 274 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 NBR2O15453 112 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 HPGDSO60760 199 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 RBBP9O75884 186 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 FCER2P06734 321 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 CNTFRP26992 372 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 PRSS3P35030 304 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 SOX6P35712 828 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 LUMP51884 338 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 SLC35B1P78383 322 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 CBX3Q13185 183 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 PLGLAQ15195 96 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 FAM71E2Q8N5Q1 922 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 WIPF2Q8TF74 440 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 RAB2BQ8WUD1 216 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 RITA1Q96K30 269 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 NOL4LQ96MY1 436 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 SLC35D1Q9NTN3 355 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 NECAP2Q9NVZ3 263 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 SCOCQ9UIL1 159 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 LINC00527Q9UJ94 153 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 OR2W1Q9Y3N9 320 aa8.38□□□□□ -1.07
TRAPPC12-213ENST00000461577 CMYA5Q8N3K9 4069 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 TCRBV4S1A1TA0A5B7 111 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 AP4M1O00189 453 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 PROP1O75360 226 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 SLC22A5O76082 557 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 TSPAN15O95858 294 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 OPN1MWP04001 364 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 THBS3P49746 956 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 TMBIM6P55061 237 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 RPS16P62249 146 aaKnown RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 C5orf64Q2M2E5 130 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 KHDC1LQ5JSQ8 128 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 NDUFA11Q86Y39 141 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 PDPNQ86YL7 162 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 STPG2Q8N412 459 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 ZNF645Q8N7E2 425 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 ZNF383Q8NA42 475 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 NPBQ8NG41 125 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 FAM110DQ8TAY7 271 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 ADTRPQ96IZ2 230 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 TSNAXQ99598 290 aaKnown RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 RNF5Q99942 180 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 CITED2Q99967 270 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 BCL7BQ9BQE9 202 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 GON7Q9BXV9 100 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 MMP27Q9H306 513 aa8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 ZNF107Q9UII5 783 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC12-213ENST00000461577 A0A1W2PRX2 142 aa8.36□□□□□ -1.07
TRAPPC12-213ENST00000461577 LINC01548A6NM66 108 aa8.36□□□□□ -1.07
TRAPPC12-213ENST00000461577 RRHO14718 337 aa8.36□□□□□ -1.07
TRAPPC12-213ENST00000461577 NDUFA3O95167 84 aa8.36□□□□□ -1.07
TRAPPC12-213ENST00000461577 HLA-DQB1P01920 261 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms