RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 OR8U9P0C7N5 309 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 GPR12P47775 334 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 VBP1P61758 197 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 MMDQ15546 238 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 NSUN5P1Q3KNT7 163 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 GLDNQ6ZMI3 551 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 ANKRD13BQ86YJ7 626 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 NPBQ8NG41 125 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 OR8U1Q8NH10 309 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 FAM110DQ8TAY7 271 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 NOL4LQ96MY1 436 aaPredicted RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 GINS4Q9BRT9 223 aa12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 MRPS26Q9BYN8 205 aaKnown RBP12.99□□□□□ -0.33
SMARCD3-204ENST00000460431 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 CTXN2P0C2S0 81 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 CNTFRP26992 372 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 SOX6P35712 828 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 FOXRED2Q8IWF2 684 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 STPG2Q8N412 459 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 DRAXINQ8NBI3 349 aaPredicted RBP12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 OR4X2Q8NGF9 303 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 S100A16Q96FQ6 103 aaKnown RBP12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 AUNIPQ9H7T9 357 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 WASHC3Q9Y3C0 194 aa12.98□□□□□ -0.33
SMARCD3-204ENST00000460431 NOTCH1P46531 2555 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 TCRBV4S1A1TA0A5B7 111 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 AP4M1O00189 453 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 NBR2O15453 112 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 XRCC3O43542 346 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 NDUFA3O95167 84 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 OPN1MWP04001 364 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 TFAP2AP05549 437 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 OPN1MW2P0DN77 364 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 OPN1MW3P0DN78 364 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 ALDH3B2P48448 385 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 LINC00205P59089 165 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 CTF1Q16619 201 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 UBE2NLQ5JXB2 153 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 ZNF329Q86UD4 541 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 ZNF383Q8NA42 475 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 RNF5Q99942 180 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 HSPB9Q9BQS6 159 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 NAA50Q9GZZ1 169 aaKnown RBP12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 TSSC4Q9Y5U2 329 aaPredicted RBP12.97□□□□□ -0.33
SMARCD3-204ENST00000460431 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 H7C2Y5 167 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 M0R1X1 148 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 RBBP9O75884 186 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 GABARAPO95166 117 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 SAMD12Q8N8I0 201 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
SMARCD3-204ENST00000460431 HLA-DRB1P01911 266 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 SLC35B1P78383 322 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 GPR107Q5VW38 600 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 LIN54Q6MZP7 749 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 GVQW1Q8N7I0 195 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 C5orf30Q96GV9 206 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 OR4F4Q96R69 305 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 KIAA1456Q9P272 454 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 ZNF107Q9UII5 783 aaPredicted RBP12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 ZNF580Q9UK33 172 aa12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
SMARCD3-204ENST00000460431 TGP01266 2768 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 RRHO14718 337 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 IGKV1-16P04430 117 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 IGF1P05019 195 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 PTHLHP12272 177 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 RORCP51449 518 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 PDPNQ86YL7 162 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 CMTM3Q96MX0 182 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 OR2W1Q9Y3N9 320 aa12.94□□□□□ -0.34
SMARCD3-204ENST00000460431 TNCP24821 2201 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 IGHV7-81A0A0B4J1V7 117 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 APOA2P02652 100 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 NFYAP23511 347 aaPredicted RBP12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 CBX5P45973 191 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 LUMP51884 338 aaPredicted RBP12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 TAGLNQ01995 201 aaKnown RBP12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 GPR141Q7Z602 305 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 ACOT12Q8WYK0 555 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
SMARCD3-204ENST00000460431 COMMD3Q9UBI1 195 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms