RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 FAM131AQ6UXB0 335 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 FOXRED2Q8IWF2 684 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 FAM71E2Q8N5Q1 922 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 OR4X2Q8NGF9 303 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 NOL4LQ96MY1 436 aaPredicted RBP16.41■□□□□ 0.22
VARS-218ENST00000459667 BCL7BQ9BQE9 202 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 ST6GALNAC5Q9BVH7 336 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 IGKV1D-8A0A087WSZ0 117 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 PSMB11A5LHX3 300 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 OR5H14A6NHG9 310 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 XRCC3O43542 346 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 CT45A6P0DMU7 189 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 CT45A5P0DMU8 189 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 CT45A7P0DMV0 189 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 CD83Q01151 205 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 GLDNQ6ZMI3 551 aaPredicted RBP16.4■□□□□ 0.22
VARS-218ENST00000459667 CHPT1Q8WUD6 406 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 CMTM3Q96MX0 182 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 GINS4Q9BRT9 223 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 COMMD3Q9UBI1 195 aa16.4■□□□□ 0.22
VARS-218ENST00000459667 ADARB2-AS1A8MUL3 147 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 KCNAB3O43448 404 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 CTXN2P0C2S0 81 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 TMBIM6P55061 237 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 TCTEX1D4Q5JR98 221 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 TMEM69Q5SWH9 247 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 AUNIPQ9H7T9 357 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 LINC00527Q9UJ94 153 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 VWFP04275 2813 aa16.39■□□□□ 0.21
VARS-218ENST00000459667 SMIM31A0A1B0GVY4 71 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 A0A1W2PRX2 142 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 TCRBV4S1A1TA0A5B7 111 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 LINC01548A6NM66 108 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 H0YJW9 148 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 NBR2O15453 112 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 SSX5O60225 188 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 APOA1P02647 267 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OPN1MWP04001 364 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OR8U9P0C7N5 309 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OPN1MW2P0DN77 364 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OPN1MW3P0DN78 364 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 ZNF182P17025 639 aaPredicted RBP16.38■□□□□ 0.21
VARS-218ENST00000459667 CNTFRP26992 372 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 MC5RP33032 325 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 SOX6P35712 828 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OR8U1Q8NH10 309 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 RITA1Q96K30 269 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 OR2D2Q9H210 308 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 CMYA5Q8N3K9 4069 aa16.38■□□□□ 0.21
VARS-218ENST00000459667 AP4M1O00189 453 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 PROP1O75360 226 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 CBX5P45973 191 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 ZNF329Q86UD4 541 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 H1FOOQ8IZA3 346 aaPredicted RBP16.37■□□□□ 0.21
VARS-218ENST00000459667 STPG2Q8N412 459 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 DRAXINQ8NBI3 349 aaPredicted RBP16.37■□□□□ 0.21
VARS-218ENST00000459667 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.37■□□□□ 0.21
VARS-218ENST00000459667 OR5AN1Q8NGI8 311 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 HSPB9Q9BQS6 159 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 WASHC3Q9Y3C0 194 aa16.37■□□□□ 0.21
VARS-218ENST00000459667 RBM7Q9Y580 266 aaKnown RBP16.37■□□□□ 0.21
VARS-218ENST00000459667 TSSC4Q9Y5U2 329 aaPredicted RBP16.37■□□□□ 0.21
VARS-218ENST00000459667 H7C2Y5 167 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 M0R1X1 148 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 SLC35B1P78383 322 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 KHDC1LQ5JSQ8 128 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 CNIH2Q6PI25 160 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 OR4F17Q8NGA8 305 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 R3HDM4Q96D70 268 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 OR4F4Q96R69 305 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 KIAA1456Q9P272 454 aa16.36■□□□□ 0.21
VARS-218ENST00000459667 ZNF107Q9UII5 783 aaPredicted RBP16.36■□□□□ 0.21
VARS-218ENST00000459667 RBBP9O75884 186 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 NDUFA3O95167 84 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 ARPC4P59998 168 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 ZNF383Q8NA42 475 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 NPBQ8NG41 125 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 IFT46Q9NQC8 304 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 ANXA10Q9UJ72 324 aa16.35■□□□□ 0.21
VARS-218ENST00000459667 APOA2P02652 100 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 EIF4EP06730 217 aaKnown RBP16.34■□□□□ 0.21
VARS-218ENST00000459667 LINC00205P59089 165 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 TAS2R20P59543 309 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 C5orf64Q2M2E5 130 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 BEST4Q8NFU0 473 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 GON7Q9BXV9 100 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 SDHAF2Q9NX18 166 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 GAB2Q9UQC2 676 aa16.34■□□□□ 0.21
VARS-218ENST00000459667 FAM25AB3EWG3 89 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 FAM25CB3EWG5 89 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 FAM25GB3EWG6 89 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 HPGDSO60760 199 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 HLA-DRB1P01911 266 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 SPCS2Q15005 226 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 HOGA1Q86XE5 327 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 PDPNQ86YL7 162 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 COMMD1Q8N668 190 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 C5orf30Q96GV9 206 aa16.33■□□□□ 0.2
VARS-218ENST00000459667 RRHO14718 337 aa16.32■□□□□ 0.2
VARS-218ENST00000459667 PF4V1P10720 104 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms