RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 RNPS1Q15287 305 aaKnown RBP10□□□□□ -0.81
SYNE2-207ENST00000458046 AWAT1Q58HT5 328 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF611Q8N823 705 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 DMBX1Q8NFW5 382 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 MOB3AQ96BX8 217 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 ARV1Q9H2C2 271 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 NKX2-6A6NCS4 301 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 FAM24AA6NFZ4 105 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 HSPB6O14558 160 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 SRD5A2P31213 254 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 SPIN3Q5JUX0 258 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF841Q6ZN19 808 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 GINS3Q9BRX5 216 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 SCRT1Q9BWW7 348 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 GPR35Q9HC97 309 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 PSG11Q9UQ72 335 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 ELOA3CA0A087WX78 387 aaPredicted RBP10□□□□□ -0.81
SYNE2-207ENST00000458046 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 PPYP01298 95 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 PPBPP02775 128 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 OR13C7P0DN81 318 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 GZMHP20718 246 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 FUT3P21217 361 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 RBM11P57052 281 aaKnown RBP10□□□□□ -0.81
SYNE2-207ENST00000458046 Q0VFX4 171 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 LRTM2Q8N967 370 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 FAM213BQ8TBF2 198 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 HIST1H2BAQ96A08 127 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 NTNG2Q96CW9 530 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 C2orf88Q9BSF0 95 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 OR51M1Q9H341 326 aa10□□□□□ -0.81
SYNE2-207ENST00000458046 MPPED1O15442 326 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 NXPH3O95157 252 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 FBP1P09467 338 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 ITGA3P26006 1051 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 RAB5BP61020 215 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 AESQ08117 197 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 GNMTQ14749 295 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 DAZAP2Q15038 168 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-207ENST00000458046 IL17RELQ6ZVW7 336 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 HPSE2Q8WWQ2 592 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 SLC7A10Q9NS82 523 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 DEPPQ9NTK1 212 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF816-ZNF321PA0A0X1KG74 233 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYNE2-207ENST00000458046 ARG1P05089 322 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 SP9P0CG40 484 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 CD82P27701 267 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 GNRHRP30968 328 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 PPP1CCP36873 323 aaKnown RBP9.99□□□□□ -0.81
SYNE2-207ENST00000458046 EWSR1Q01844 656 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYNE2-207ENST00000458046 SRYQ05066 204 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 C15orf54Q8N8G6 183 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 ABHD14AQ9BUJ0 271 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 GOLT1BQ9Y3E0 138 aa9.99□□□□□ -0.81
SYNE2-207ENST00000458046 PQLC2LA1A4F0 135 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 PINLYPA6NC86 204 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 UMAD1C9J7I0 102 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 PMCHP20382 165 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 BCL3P20749 454 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 GDF1P27539 372 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 OR3A1P47881 315 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 BSXQ3C1V8 233 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 KRTAP27-1Q3LI81 207 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 ABHD5Q8WTS1 349 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 EXTL1Q92935 676 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 RARRES2Q99969 163 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 IL36RNQ9UBH0 155 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 IL17BQ9UHF5 180 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 TMED3Q9Y3Q3 217 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 SMCO3A2RU48 225 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 LRRC3CA6NJW4 275 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 C1orf196B1AJZ1 125 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 M0QZK8 103 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 SCTP09683 121 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 PCBD1P61457 104 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 DEFA6Q01524 100 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 OR8B8Q15620 311 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 VAMP3Q15836 100 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 TBC1D26Q86UD7 250 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
SYNE2-207ENST00000458046 ZNF808Q8N4W9 903 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-207ENST00000458046 A0A1W2PPE3 182 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 TIMP3P35625 211 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 GPM6AP51674 278 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 RPL11P62913 178 aaKnown RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 CCL20P78556 96 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 FAM24BQ8N5W8 94 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 ZFP62Q8NB50 900 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-207ENST00000458046 ADGRG7Q96K78 797 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 RNF122Q9H9V4 155 aa9.97□□□□□ -0.81
SYNE2-207ENST00000458046 IL36GQ9NZH8 169 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms