RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 WASHC3Q9Y3C0 194 aa14.3□□□□□ -0.12
PDLIM2-215ENST00000456545 TRIM64CA6NLI5 447 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 LINC01548A6NM66 108 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 M0R1X1 148 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 NBR2O15453 112 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 DIRAS3O95661 229 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 TFAP2AP05549 437 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 CTXN2P0C2S0 81 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 STPG2Q8N412 459 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 DRAXINQ8NBI3 349 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 S100A16Q96FQ6 103 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 OR2D2Q9H210 308 aa14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 ZNF107Q9UII5 783 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-215ENST00000456545 A0A0A6YYH2 397 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 A6NJ64 397 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 APOA2P02652 100 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 CNTFRP26992 372 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 LIN54Q6MZP7 749 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 Q6ZS49 121 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 FAM71E2Q8N5Q1 922 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 COMMD1Q8N668 190 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 RITA1Q96K30 269 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 TOLLIPQ9H0E2 274 aa14.28□□□□□ -0.12
PDLIM2-215ENST00000456545 H0YJW9 148 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 J3QRK9 145 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 RBBP9O75884 186 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 VDAC1P21796 283 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 VBP1P61758 197 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 RPS16P62249 146 aaKnown RBP14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 CBX3Q13185 183 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 TCTEX1D4Q5JR98 221 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 SLC25A38Q96DW6 304 aa14.27□□□□□ -0.13
PDLIM2-215ENST00000456545 IGKV1D-8A0A087WSZ0 117 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 PF4P02776 101 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 ARPC4P59998 168 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 C5orf64Q2M2E5 130 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 TEX38Q6PEX7 206 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 CNIH2Q6PI25 160 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 NPBQ8NG41 125 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 OR5AN1Q8NGI8 311 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 OR13F1Q8NGS4 319 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 RNF5Q99942 180 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 HSPB9Q9BQS6 159 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 MRPS26Q9BYN8 205 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 GAB2Q9UQC2 676 aa14.26□□□□□ -0.13
PDLIM2-215ENST00000456545 ADARB2-AS1A8MUL3 147 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 NUDT19A8MXV4 375 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 LUMP51884 338 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 NCS1P62166 190 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 H1FOOQ8IZA3 346 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 FLYWCH2Q96CP2 140 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 TSNAXQ99598 290 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 FBXL15Q9H469 300 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 SLC35D1Q9NTN3 355 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 ZFP57Q9NU63 452 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 SDHAF2Q9NX18 166 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 ANXA10Q9UJ72 324 aa14.25□□□□□ -0.13
PDLIM2-215ENST00000456545 NBEAL1Q6ZS30 2694 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 RRHO14718 337 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 SSX5O60225 188 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 PROP1O75360 226 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 HLA-DRB1P01911 266 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 THBS3P49746 956 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 TAGLNQ01995 201 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 CXorf66Q5JRM2 361 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 ZNF383Q8NA42 475 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 BEST4Q8NFU0 473 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 ABHD5Q8WTS1 349 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 SLC25A46Q96AG3 418 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 KCTD12Q96CX2 325 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 OR51J1Q9H342 316 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 AUNIPQ9H7T9 357 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 COMMD3Q9UBI1 195 aa14.24□□□□□ -0.13
PDLIM2-215ENST00000456545 WNK1Q9H4A3 2382 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 SMIM31A0A1B0GVY4 71 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 XRCC3O43542 346 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 NDUFA3O95167 84 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 SMIM18P0DKX4 95 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 CD33P20138 364 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 NFYAP23511 347 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 CBX5P45973 191 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 RORCP51449 518 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 LINC00205P59089 165 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 DEFA6Q01524 100 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 RTL8BQ17RB0 113 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 TMEM69Q5SWH9 247 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 GPR107Q5VW38 600 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 GPR141Q7Z602 305 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 IFT46Q9NQC8 304 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 METTL1Q9UBP6 276 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 OR2W1Q9Y3N9 320 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 WSB1Q9Y6I7 421 aa14.23□□□□□ -0.13
PDLIM2-215ENST00000456545 SLC22A5O76082 557 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms