RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 MRPL20Q9BYC9 149 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ABRACLQ9P1F3 81 aa12.93□□□□□ -0.34
RAB11FIP3-204ENST00000449879 JPT1Q9UK76 154 aa12.93□□□□□ -0.34
RAB11FIP3-204ENST00000449879 LSM4Q9Y4Z0 139 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP3-204ENST00000449879 TRBV6-6A0A0A6YYG2 114 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 YPEL1O60688 119 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR3A3P47888 321 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 MRPS15P82914 257 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HTD2P86397 168 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HMGN3Q15651 99 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ZNF880Q6PDB4 577 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 SETD6Q8TBK2 473 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 LGALS14Q8TCE9 139 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR5B12Q96R08 314 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 NABP2Q9BQ15 211 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 CMSS1Q9BQ75 279 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ATG5Q9H1Y0 275 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 PARP11Q9NR21 331 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ZNF580Q9UK33 172 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 MGAT4AQ9UM21 535 aa12.92□□□□□ -0.34
RAB11FIP3-204ENST00000449879 RAB27BO00194 218 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 TMEM127O75204 238 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 RGS11O94810 467 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 SNRPBP14678 240 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 PPIFP30405 207 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 SCAND1P57086 179 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 LSM3P62310 102 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 FHL3Q13643 280 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 KIAA0141Q14154 515 aaPredicted RBP12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 MOGAT2Q3SYC2 334 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ZNF491Q8N8L2 437 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR1N2Q8NGR9 330 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 UBE2E2Q96LR5 201 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 FUNDC2Q9BWH2 189 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 MRPS26Q9BYN8 205 aaKnown RBP12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
RAB11FIP3-204ENST00000449879 IGHV7-81A0A0B4J1V7 117 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 TRAV41A0A0B4J266 112 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 NBR2O15453 112 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 SCGNO76038 276 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HLA-DRB1P01911 266 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 CD3GP09693 182 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 TGFBR1P36897 503 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 HLA-DRB3P79483 266 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ARL6IP1Q15041 203 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 C5orf64Q2M2E5 130 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 IDNKQ5T6J7 187 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ZNF833PQ6ZTB9 187 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 CROCCP3Q8IVE0 287 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 OR2AK2Q8NG84 335 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 MYOZ3Q8TDC0 251 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 IL1F10Q8WWZ1 152 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 KIAA1456Q9P272 454 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 VSIG4Q9Y279 399 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 ETV7Q9Y603 341 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 U3KQK5 164 aa12.9□□□□□ -0.34
RAB11FIP3-204ENST00000449879 A0A075B6Q4 140 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 SAA2-SAA4A0A096LPE2 208 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 I3L521 148 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 MFNGO00587 321 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 SAA2P0DJI9 122 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 GNB3P16520 340 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RAB9AP51151 201 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ZNF616Q08AN1 781 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ASCL2Q99929 193 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 Q9N2K0 584 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RHBDL2Q9NX52 303 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ZNF256Q9Y2P7 627 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 KCNK7Q9Y2U2 307 aa12.89□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ST8SIA5O15466 376 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 LY86O95711 162 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 GNB1P62873 340 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ASPHD1Q5U4P2 390 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 NPBQ8NG41 125 aa12.88□□□□□ -0.35
RAB11FIP3-204ENST00000449879 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 FCGR3AP08637 254 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RUNX1Q01196 453 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 ECSCRQ19T08 205 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 FAM131AQ6UXB0 335 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 FBXL15Q9H469 300 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 PIPOXQ9P0Z9 390 aa12.87□□□□□ -0.35
RAB11FIP3-204ENST00000449879 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
RAB11FIP3-204ENST00000449879 RAB29O14966 203 aa12.86□□□□□ -0.35
RAB11FIP3-204ENST00000449879 NDUFA3O95167 84 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms