RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TCTEX1D2Q8WW35 142 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 PLEKHF2Q9H8W4 249 aa12.4□□□□□ -0.42
SF1-211ENST00000448404 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.42
SF1-211ENST00000448404 A0A1W2PPH5 198 aa12.4□□□□□ -0.43
SF1-211ENST00000448404 C17orf98A8MV24 154 aa12.4□□□□□ -0.43
SF1-211ENST00000448404 HMGB3O15347 200 aaKnown RBP12.4□□□□□ -0.43
SF1-211ENST00000448404 AGAP20933 346 aa12.4□□□□□ -0.43
SF1-211ENST00000448404 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.43
SF1-211ENST00000448404 HAPLN4Q86UW8 402 aa12.4□□□□□ -0.43
SF1-211ENST00000448404 GGACTQ9BVM4 153 aa12.4□□□□□ -0.43
SF1-211ENST00000448404 RIMS4Q9H426 269 aaPredicted RBP12.4□□□□□ -0.43
SF1-211ENST00000448404 ZNF729A6NN14 1252 aaPredicted RBP12.39□□□□□ -0.43
SF1-211ENST00000448404 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.39□□□□□ -0.43
SF1-211ENST00000448404 OR8G2PQ6IF36 304 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 RHOVQ96L33 236 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 PLSCR4Q9NRQ2 329 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 DSCAMO60469 2012 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 A0A1B0GV90 55 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 S1PR2O95136 353 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 SEC11BP0C7V7 166 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 SRPXP78539 464 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 DEFA6Q01524 100 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 CDPF1Q6NVV7 123 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 SSX9Q7RTT3 188 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 VKORC1L1Q8N0U8 176 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 RBMXL3Q8N7X1 1067 aaKnown RBP12.39□□□□□ -0.43
SF1-211ENST00000448404 ZDHHC16Q969W1 377 aa12.39□□□□□ -0.43
SF1-211ENST00000448404 SNRNP40Q96DI7 357 aaKnown RBP12.39□□□□□ -0.43
SF1-211ENST00000448404 TRBV6-6A0A0A6YYG2 114 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 K7N7A8 449 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 ARG1P05089 322 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
SF1-211ENST00000448404 LINC00596Q86U02 117 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 MOGAT3Q86VF5 341 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 SPIN2AQ99865 258 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 SPIN2BQ9BPZ2 258 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 MBNL3Q9NUK0 354 aaKnown RBP12.38□□□□□ -0.43
SF1-211ENST00000448404 CLN8Q9UBY8 286 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 LINC00473A8K010 186 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 M0R036 132 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 PITX3O75364 302 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 DVL1P1P54792 670 aaPredicted RBP12.38□□□□□ -0.43
SF1-211ENST00000448404 HMGN3Q15651 99 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 Q3ZCU0 254 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 SLC25A24Q6NUK1 477 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 FAM24BQ8N5W8 94 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 GALMQ96C23 342 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
SF1-211ENST00000448404 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
SF1-211ENST00000448404 NUDT19A8MXV4 375 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 IGHV2-5P01817 119 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 SSTP61278 116 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 SRSF7Q16629 238 aaKnown RBP eCLIP12.37□□□□□ -0.436e-7■□□□□ 8.9
SF1-211ENST00000448404 ZNF718Q3SXZ3 478 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 SSX7Q7RTT5 188 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 OR2V2Q96R30 315 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 IGKV1D-17A0A075B6S4 117 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 TMEM30CPA0ZSE6 113 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 ZNF891A8MT65 544 aaPredicted RBP12.37□□□□□ -0.43
SF1-211ENST00000448404 YIF1AO95070 293 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 EDDM3BP56851 147 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 RAB2AP61019 212 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 PRR30Q53SZ7 412 aaPredicted RBP12.37□□□□□ -0.43
SF1-211ENST00000448404 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 ZNRD1Q9P1U0 126 aa12.37□□□□□ -0.43
SF1-211ENST00000448404 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
SF1-211ENST00000448404 ELLP55199 621 aaPredicted RBP12.36□□□□□ -0.43
SF1-211ENST00000448404 AWAT1Q58HT5 328 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 SPSB3Q6PJ21 355 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 DMRT1Q9Y5R6 373 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 SYNGR2O43760 224 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 RBMXL2O75526 392 aaKnown RBP12.36□□□□□ -0.43
SF1-211ENST00000448404 RAB5AP20339 215 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 Q8IYB0 196 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 LYPD6BQ8NI32 183 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 PSENENQ9NZ42 101 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 TNCP24821 2201 aa12.36□□□□□ -0.43
SF1-211ENST00000448404 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 AP4M1O00189 453 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 IGLV1-44P01699 117 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 BEND4Q6ZU67 534 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 DMRTC2Q8IXT2 367 aaPredicted RBP12.35□□□□□ -0.43
SF1-211ENST00000448404 TOLLIPQ9H0E2 274 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 UMAD1C9J7I0 102 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
SF1-211ENST00000448404 PROP1O75360 226 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 CLDN1O95832 211 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 PRDX2P32119 198 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 RPL39P5Q59GN2 51 aa12.35□□□□□ -0.43
SF1-211ENST00000448404 C1orf229Q6ZS94 237 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms