RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 OPN1MWP04001 364 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TFAP2AP05549 437 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OPN1MW2P0DN77 364 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OPN1MW3P0DN78 364 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ALDH3B2P48448 385 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ACTBP60709 375 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SLC35B1P78383 322 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TMEM95Q3KNT9 176 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FAM131AQ6UXB0 335 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CENPVQ7Z7K6 275 aaPredicted RBP8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 BEST4Q8NFU0 473 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CHPT1Q8WUD6 406 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AGMATQ9BSE5 352 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MMP27Q9H306 513 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AUNIPQ9H7T9 357 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SCOCQ9UIL1 159 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ANXA10Q9UJ72 324 aa8.23□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ZNF736B4DX44 427 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 M0R1X1 148 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AP4M1O00189 453 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NBR2O15453 112 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SLC22A5O76082 557 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 IGHG2P01859 326 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AMY1AP04745 511 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 AMY2AP04746 511 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CSF1P09603 554 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR8U9P0C7N5 309 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RPL5P46777 297 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 SRSF4Q08170 494 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 PLGLAQ15195 96 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CTF1Q16619 201 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 FBLN7Q53RD9 439 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RPL39P5Q59GN2 51 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 PDPNQ86YL7 162 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 CLVS1Q8IUQ0 354 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 H1FOOQ8IZA3 346 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 C11orf44Q8N8P7 122 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 OR8U1Q8NH10 309 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ADTRPQ96IZ2 230 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 WNT10AQ9GZT5 417 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 NECAP2Q9NVZ3 263 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 COMMD3Q9UBI1 195 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 ELF5Q9UKW6 265 aaPredicted RBP8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 RNF150Q9ULK6 438 aa8.22□□□□□ -1.09
HLA-DQB1-206ENST00000443574 MGAM2Q2M2H8 2515 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PSMB11A5LHX3 300 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SH2D7A6NKC9 451 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SSX5O60225 188 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SPDEFO95238 335 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR5H8P0DN80 308 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF182P17025 639 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 VDAC1P21796 283 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 THBS3P49746 956 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 LUMP51884 338 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TAS2R20P59543 309 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 KRTAP10-3P60369 221 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RTL8BQ17RB0 113 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 Q6ZS46 218 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FAM71E2Q8N5Q1 922 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 COMMD1Q8N668 190 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 Q8N9W7 124 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR5AU1Q8NGC0 362 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR5AN1Q8NGI8 311 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 BORCS5Q969J3 196 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TSNAXQ99598 290 aaKnown RBP8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RNF5Q99942 180 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF107Q9UII5 783 aaPredicted RBP8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ADAM30Q9UKF2 790 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 GAB2Q9UQC2 676 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR2W1Q9Y3N9 320 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PKD1L1Q8TDX9 2849 aa8.21□□□□□ -1.1
HLA-DQB1-206ENST00000443574 IGKV1D-8A0A087WSZ0 117 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FAM25AB3EWG3 89 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FAM25CB3EWG5 89 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 FAM25GB3EWG6 89 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 H0YJW9 148 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HLA-DRB1P01911 266 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CT45A6P0DMU7 189 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CT45A5P0DMU8 189 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 CT45A7P0DMV0 189 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 RRASP10301 218 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 PRSS3P35030 304 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TMBIM6P55061 237 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 TAS2R46P59540 309 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 GLDNQ6ZMI3 551 aaPredicted RBP8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 HOGA1Q86XE5 327 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 ZNF645Q8N7E2 425 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR4F17Q8NGA8 305 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 OR4F4Q96R69 305 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 NAA50Q9GZZ1 169 aaKnown RBP8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
HLA-DQB1-206ENST00000443574 SDHAF2Q9NX18 166 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms