RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 CTF1Q16619 201 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 FAM131AQ6UXB0 335 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 NDUFA11Q86Y39 141 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 NPBQ8NG41 125 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 OR8U1Q8NH10 309 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 FAM110DQ8TAY7 271 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 AUNIPQ9H7T9 357 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 DIABLOQ9NR28 239 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 LINC00527Q9UJ94 153 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 GAB2Q9UQC2 676 aa12.58□□□□□ -0.4
TRAPPC12-209ENST00000441099 OR5H14A6NHG9 310 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 XRCC3O43542 346 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 MC5RP33032 325 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 NSUN5P1Q3KNT7 163 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 ZNF383Q8NA42 475 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 C5orf30Q96GV9 206 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
TRAPPC12-209ENST00000441099 PSMB11A5LHX3 300 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 NDUFA3O95167 84 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 CTXN2P0C2S0 81 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 SOX6P35712 828 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 GPR107Q5VW38 600 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 STPG2Q8N412 459 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 GVQW1Q8N7I0 195 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 S100A16Q96FQ6 103 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 OR2D2Q9H210 308 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 SDHAF2Q9NX18 166 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 ANXA10Q9UJ72 324 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 WASHC3Q9Y3C0 194 aa12.56□□□□□ -0.4
TRAPPC12-209ENST00000441099 M0R1X1 148 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 AP4M1O00189 453 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 NBR2O15453 112 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 KCNAB3O43448 404 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 OPN1MWP04001 364 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 PTHLHP12272 177 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 HOGA1Q86XE5 327 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 FOXRED2Q8IWF2 684 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 RNF5Q99942 180 aa12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 ZNF107Q9UII5 783 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-209ENST00000441099 MEGF8Q7Z7M0 2845 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 TCRBV4S1A1TA0A5B7 111 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 H7C2Y5 167 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 RBBP9O75884 186 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 HLA-DRB1P01911 266 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 NFYAP23511 347 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 BEST4Q8NFU0 473 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-209ENST00000441099 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 IGF1P05019 195 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 RORCP51449 518 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 TAS2R20P59543 309 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 CFHR3Q02985 330 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 GPR141Q7Z602 305 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 SNAPC3Q92966 411 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 R3HDM4Q96D70 268 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 KIAA1456Q9P272 454 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 OR2W1Q9Y3N9 320 aa12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
TRAPPC12-209ENST00000441099 IGHV7-81A0A0B4J1V7 117 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 RRHO14718 337 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 TUSC2O75896 110 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 CBX5P45973 191 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 SLC35B1P78383 322 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 TMEM69Q5SWH9 247 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 ACOT12Q8WYK0 555 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 FBXL15Q9H469 300 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 SLC35D1Q9NTN3 355 aa12.52□□□□□ -0.41
TRAPPC12-209ENST00000441099 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 J3QRK9 145 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 FCN1O00602 326 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 APOA1P02647 267 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 APOA2P02652 100 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 FCER2P06734 321 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 LUMP51884 338 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 ARPC4P59998 168 aa12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 RPS16P62249 146 aaKnown RBP12.51□□□□□ -0.41
TRAPPC12-209ENST00000441099 PSG5Q15238 335 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms