RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 FUNDC2Q9BWH2 189 aa18.65■□□□□ 0.58
VARS-217ENST00000440048 SPATA2Q9UM82 520 aa18.65■□□□□ 0.58
VARS-217ENST00000440048 OR5H14A6NHG9 310 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 H0YJW9 148 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 AP4M1O00189 453 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 KCNAB3O43448 404 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 SOX6P35712 828 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 GNG2P59768 71 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 PITPNAQ00169 270 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 PNLIPRP3Q17RR3 467 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 OR4F17Q8NGA8 305 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 OR5AN1Q8NGI8 311 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 OR13F1Q8NGS4 319 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 OR4F4Q96R69 305 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 DCSTAMPQ9H295 470 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 TSSC4Q9Y5U2 329 aaPredicted RBP18.64■□□□□ 0.57
VARS-217ENST00000440048 PLXNB1O43157 2135 aa18.64■□□□□ 0.57
VARS-217ENST00000440048 TRAV18A0A075B6X5 111 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 NBR2O15453 112 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 SSX5O60225 188 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 OR8U9P0C7N5 309 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 MC5RP33032 325 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 DEFA6Q01524 100 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 DRAXINQ8NBI3 349 aaPredicted RBP18.63■□□□□ 0.57
VARS-217ENST00000440048 OR8U1Q8NH10 309 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 GINS4Q9BRT9 223 aa18.63■□□□□ 0.57
VARS-217ENST00000440048 A0A0A6YYH2 397 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 A6NJ64 397 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 LINC00205P59089 165 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.62■□□□□ 0.57
VARS-217ENST00000440048 NPBQ8NG41 125 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 OR2D2Q9H210 308 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 ZNF107Q9UII5 783 aaPredicted RBP18.62■□□□□ 0.57
VARS-217ENST00000440048 WASHC3Q9Y3C0 194 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 NOTCH3Q9UM47 2321 aa18.62■□□□□ 0.57
VARS-217ENST00000440048 H7C2Y5 167 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 M0R1X1 148 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 NDUFA3O95167 84 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 TFAP2AP05549 437 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 NCS1P62166 190 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 SLC35B1P78383 322 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 C5orf64Q2M2E5 130 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 KHDC1LQ5JSQ8 128 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 H1FOOQ8IZA3 346 aaPredicted RBP18.61■□□□□ 0.57
VARS-217ENST00000440048 ZNF383Q8NA42 475 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 DIABLOQ9NR28 239 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 GAB2Q9UQC2 676 aa18.61■□□□□ 0.57
VARS-217ENST00000440048 SDHAF2Q9NX18 166 aa18.6■□□□□ 0.57
VARS-217ENST00000440048 KIAA1456Q9P272 454 aa18.6■□□□□ 0.57
VARS-217ENST00000440048 RBBP9O75884 186 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 HLA-DRB1P01911 266 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 VBP1P61758 197 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 COMMD1Q8N668 190 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 SLC25A46Q96AG3 418 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 C5orf30Q96GV9 206 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 AUNIPQ9H7T9 357 aa18.59■□□□□ 0.57
VARS-217ENST00000440048 RBM7Q9Y580 266 aaKnown RBP18.59■□□□□ 0.57
VARS-217ENST00000440048 IGF1P05019 195 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 CTXN2P0C2S0 81 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 PDLIM3Q53GG5 364 aaPredicted RBP18.58■□□□□ 0.56
VARS-217ENST00000440048 LIN54Q6MZP7 749 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 CNIH2Q6PI25 160 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 RNF5Q99942 180 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 GON7Q9BXV9 100 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 ANXA10Q9UJ72 324 aa18.58■□□□□ 0.56
VARS-217ENST00000440048 IGHV7-81A0A0B4J1V7 117 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 RRHO14718 337 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 APOA2P02652 100 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 IGKV1-16P04430 117 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 PF4V1P10720 104 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 UBE2NLQ5JXB2 153 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 TEX38Q6PEX7 206 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 FBXL15Q9H469 300 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 ZNF580Q9UK33 172 aa18.57■□□□□ 0.56
VARS-217ENST00000440048 XRCC3O43542 346 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 PTHLHP12272 177 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 NFYAP23511 347 aaPredicted RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 RPL23AP62750 156 aaKnown RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 CFHR3Q02985 330 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 PDPNQ86YL7 162 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 C1QL4Q86Z23 238 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 GVQW1Q8N7I0 195 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 SAMD12Q8N8I0 201 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 KCTD12Q96CX2 325 aaKnown RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 S100A16Q96FQ6 103 aaKnown RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 MRPS26Q9BYN8 205 aaKnown RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 NAA50Q9GZZ1 169 aaKnown RBP18.56■□□□□ 0.56
VARS-217ENST00000440048 OR51J1Q9H342 316 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 SLC35D1Q9NTN3 355 aa18.56■□□□□ 0.56
VARS-217ENST00000440048 J3QRK9 145 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 VDAC1P21796 283 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 ANKRD13BQ86YJ7 626 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 PARP11Q9NR21 331 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 ZFP57Q9NU63 452 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 OR2W1Q9Y3N9 320 aa18.55■□□□□ 0.56
VARS-217ENST00000440048 ATP6V0E1O15342 81 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 RPS16P62249 146 aaKnown RBP18.54■□□□□ 0.56
VARS-217ENST00000440048 FOXE3Q13461 319 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 PLGLAQ15195 96 aa18.54■□□□□ 0.56
VARS-217ENST00000440048 PSG5Q15238 335 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms