RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RAB3GAP2Q9H2M9 1393 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 ABCA12Q86UK0 2595 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 ITPR3Q14573 2671 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 PAPPA2Q9BXP8 1791 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZBED9Q6R2W3 1325 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 USP24Q9UPU5 2620 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZFHX2Q9C0A1 2572 aaPredicted RBP1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 CRB1P82279 1406 aa1.75□□□□□ -2.13
TRAPPC13-204ENST00000438419 C1orf232A0A0U1RR37 186 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 GOLGA6L10A6NI86 522 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 B4DEV8 164 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 F5H5K5 113 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 K7EQS6 105 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ITGB1BP1O14713 200 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 LIN7AO14910 233 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ASS1P00966 412 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ORM1P02763 201 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PSMA1P25786 263 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 GABRA3P34903 492 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 INPP1P49441 399 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 FAM3AP98173 230 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 COTL1Q14019 142 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PAFAH1B3Q15102 231 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 MMDQ15546 238 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 TMEM31Q5JXX7 168 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 FAM45BPQ6NSW5 357 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PLEKHG7Q6ZR37 379 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 LYPD6Q86Y78 171 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 SLC13A5Q86YT5 568 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 BLIDQ8IZY5 108 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 KRTCAP2Q8N6L1 136 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZNRF2Q8NHG8 242 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 GPR22Q99680 433 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 B9D2Q9BPU9 175 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 UGT2B28Q9BY64 529 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 BCL2L14Q9BZR8 327 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 MCTS1Q9ULC4 181 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ATP6V1DQ9Y5K8 247 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZFYVE26Q68DK2 2539 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 DOPEY1Q5JWR5 2465 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 FBN3Q75N90 2809 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ATP7BP35670 1465 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PLEKHH2Q8IVE3 1493 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PARP4Q9UKK3 1724 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 BPTFQ12830 3046 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 MAP1BP46821 2468 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 TRBV24-1A0A075B6N3 115 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 IGKV1D-37A0A075B6S9 117 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 KLRC4-KLRK1H3BQV0 150 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 SH2D1AO60880 128 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ATP6V1G2O95670 118 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 F8A1P23610 371 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ADORA1P30542 326 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 GRPRP30550 384 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 GABARAPL2P60520 117 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 DEFA6Q01524 100 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 MEF2BQ02080 365 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 TSPAN31Q12999 210 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 DHRS2Q13268 280 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 APOFQ13790 326 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 CENPWQ5EE01 88 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 HES3Q5TGS1 186 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 SPNS3Q6ZMD2 512 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 LRP11Q86VZ4 500 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 DOLPP1Q86YN1 238 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 FAM9CQ8IZT9 166 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 LY6G5BQ8NDX9 201 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 OR5L1Q8NGL2 311 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 OR9I1Q8NGQ6 314 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 OR5P3Q8WZ94 311 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 HIST1H2BAQ96A08 127 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 PKMYT1Q99640 499 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZNF426Q9BUY5 554 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 CHST5Q9GZS9 411 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 HDHD2Q9H0R4 259 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 ALX4Q9H161 411 aaPredicted RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 IMP3Q9NV31 184 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 SLC23A2Q9UGH3 650 aa1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 RPUSD1Q9UJJ7 312 aaKnown RBP1.74□□□□□ -2.13
TRAPPC13-204ENST00000438419 BRD4O60885 1362 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 KIAA0100Q14667 2235 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 XRN1Q8IZH2 1706 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 RAD50Q92878 1312 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 TNS3Q68CZ2 1445 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 N4BP2Q86UW6 1770 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 C5orf42Q9H799 3197 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 KMT2EQ8IZD2 1858 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 FTCDNL1E5RQL4 147 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 OR12D1P0DN82 309 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 GADD45AP24522 165 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 EXOC3L4Q17RC7 722 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 HENMT1Q5T8I9 393 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 SDHAF4Q5VUM1 108 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 EBLN2Q6P2I7 272 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 SMIM5Q71RC9 77 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 MTERF4Q7Z6M4 381 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 PLCZ1Q86YW0 608 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 ZBTB8OSQ8IWT0 167 aa1.73□□□□□ -2.13
TRAPPC13-204ENST00000438419 HS3ST5Q8IZT8 346 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms