RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZNF221Q9UK13 617 aa11.71□□□□□ -0.53
RTN4-210ENST00000427710 TRAV18A0A075B6X5 111 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 H7C2Y5 167 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 M0R1X1 148 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 NBR2O15453 112 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 FCER2P06734 321 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 PTHLHP12272 177 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 SOX6P35712 828 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 GNG2P59768 71 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 TIMM50Q3ZCQ8 353 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 ZNF383Q8NA42 475 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 OR8H1Q8NGG4 311 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 FUNDC2Q9BWH2 189 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 FBXL15Q9H469 300 aa11.7□□□□□ -0.54
RTN4-210ENST00000427710 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.541e-7■■■□□ 17.8
RTN4-210ENST00000427710 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
RTN4-210ENST00000427710 AP4M1O00189 453 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 GSTP1P09211 210 aaKnown RBP11.69□□□□□ -0.54
RTN4-210ENST00000427710 PF4V1P10720 104 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 DTYMKP23919 212 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 SERPINB10P48595 397 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 NCS1P62166 190 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 C5orf64Q2M2E5 130 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 NAA50Q9GZZ1 169 aaKnown RBP11.69□□□□□ -0.54
RTN4-210ENST00000427710 TOLLIPQ9H0E2 274 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 SDHAF2Q9NX18 166 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 WASHC3Q9Y3C0 194 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 ETV7Q9Y603 341 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 WSB1Q9Y6I7 421 aa11.69□□□□□ -0.54
RTN4-210ENST00000427710 OR5H14A6NHG9 310 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 TFAP2AP05549 437 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 NFYAP23511 347 aaPredicted RBP11.68□□□□□ -0.54
RTN4-210ENST00000427710 VBP1P61758 197 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 RPL23AP62750 156 aaKnown RBP11.68□□□□□ -0.54
RTN4-210ENST00000427710 SLC35B1P78383 322 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 ARL6IP1Q15041 203 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 Q6ZS49 121 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 H1FOOQ8IZA3 346 aaPredicted RBP11.68□□□□□ -0.54
RTN4-210ENST00000427710 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 NPBQ8NG41 125 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 OR5AN1Q8NGI8 311 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 CLCC1Q96S66 551 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 KIAA1456Q9P272 454 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 SPATA2Q9UM82 520 aa11.68□□□□□ -0.54
RTN4-210ENST00000427710 RBM7Q9Y580 266 aaKnown RBP11.68□□□□□ -0.54
RTN4-210ENST00000427710 IGHV7-81A0A0B4J1V7 117 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 MEIS3P1A6NDR6 274 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 G3V318 75 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 FCN1O00602 326 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 RRHO14718 337 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 ATP6V0E1O15342 81 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 NDUFA3O95167 84 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 RPLP1P05386 114 aaKnown RBP11.67□□□□□ -0.54
RTN4-210ENST00000427710 NDPQ00604 133 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 SRSF7Q16629 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
RTN4-210ENST00000427710 PNLIPRP3Q17RR3 467 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 DUX3Q96PT4 197 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
RTN4-210ENST00000427710 NUDT19A8MXV4 375 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 SCGNO76038 276 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 PF4P02776 101 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
RTN4-210ENST00000427710 MC5RP33032 325 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 SCAND1P57086 179 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 RPS16P62249 146 aaKnown RBP11.66□□□□□ -0.54
RTN4-210ENST00000427710 CFHR3Q02985 330 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 PLGLAQ15195 96 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 KLHL30-AS1Q8NEE0 82 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 GHITMQ9H3K2 345 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 TPSG1Q9NRR2 321 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 FBXO7Q9Y3I1 522 aa11.66□□□□□ -0.54
RTN4-210ENST00000427710 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
RTN4-210ENST00000427710 APOA2P02652 100 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 CD33P20138 364 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 VDAC1P21796 283 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 PITPNAQ00169 270 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 PSG5Q15238 335 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 TEX38Q6PEX7 206 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 SAMD12Q8N8I0 201 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.65□□□□□ -0.54
RTN4-210ENST00000427710 BVESQ8NE79 360 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 DCSTAMPQ9H295 470 aa11.65□□□□□ -0.54
RTN4-210ENST00000427710 DIABLOQ9NR28 239 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms