RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC35G3Q8N808 338 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 LRTM2Q8N967 370 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 OR10X1Q8NGY0 326 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 OR4S2Q8NH73 311 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 IGFBPL1Q8WX77 278 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 FAM168AQ92567 244 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 TNFRSF14Q92956 283 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 PERPQ96FX8 193 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 HYLS1Q96M11 299 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 PSMG3-AS1Q96PY0 264 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 TP53RKQ96S44 253 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 S1PR3Q99500 378 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 NMES1Q9C002 83 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 BPESC1Q9GZL8 116 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 FAM212BQ9NTI7 297 aaPredicted RBP4.91□□□□□ -1.62
HMGB3-202ENST00000419110 ZFP57Q9NU63 452 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 PIPOXQ9P0Z9 390 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 PRELID3BQ9Y3B1 194 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 TMED3Q9Y3Q3 217 aa4.91□□□□□ -1.62
HMGB3-202ENST00000419110 LRBAP50851 2863 aa4.9□□□□□ -1.62
HMGB3-202ENST00000419110 CR1P17927 2039 aa4.9□□□□□ -1.62
HMGB3-202ENST00000419110 COL12A1Q99715 3063 aa4.9□□□□□ -1.62
HMGB3-202ENST00000419110 LOC105371242A0A075B767 164 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 PPIAL4CA0A0B4J2A2 164 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 C13orf42A0A1B0GVH6 325 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 M0R1W7 72 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 TOR1AO14656 332 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 TNFRSF13BO14836 293 aaPredicted RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 RAB29O14966 203 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 RBFOX2O43251 390 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 TXNL1O43396 289 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 NDUFS7O75251 213 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 FOXH1O75593 365 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 PGLYRP1O75594 196 aaPredicted RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 ADAP1O75689 374 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 OR2A4O95047 310 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 SIX6O95475 246 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CDS2O95674 445 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 SCGB1D2O95969 90 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 PPIAL4GP0DN37 164 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CGB3P0DN86 165 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CGB7P0DN87 165 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 IGHV1-8P0DP01 117 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 HLA-GP17693 338 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 GZMKP49863 264 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 DLX6P56179 175 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 H2BFSP57053 126 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 RTL8BQ17RB0 113 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 IAH1Q2TAA2 248 aaPredicted RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 SP6Q3SY56 376 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 DCAF12L2Q5VW00 463 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 GGNBP1Q5YKI7 109 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM200BQ69YZ2 307 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 DHRS7BQ6IAN0 325 aaPredicted RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 BTNL3Q6UXE8 466 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 SLC25A48Q6ZT89 311 aaKnown RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 LYG1Q8N1E2 194 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 C8orf31Q8N9H6 132 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF439Q8NDP4 499 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 OR9G1Q8NH87 305 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 THAP6Q8TBB0 222 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CD300LFQ8TDQ1 290 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 MSI2Q96DH6 328 aaKnown RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 RRNAD1Q96FB5 475 aaKnown RBP4.9□□□□□ -1.63
HMGB3-202ENST00000419110 ABHD14BQ96IU4 210 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 OR2A7Q96R45 310 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CLEC7AQ9BXN2 247 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 GSX2Q9BZM3 304 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM133Q9H2Q1 129 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 SDHAF2Q9NX18 166 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 PRR13Q9NZ81 148 aa4.9□□□□□ -1.63
HMGB3-202ENST00000419110 CREBBPQ92793 2442 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 TET2Q6N021 2002 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 A0A087X0M5 115 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 A0A1B0GX30 115 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SCO2A0A1W2PP80 73 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C22orf46C9J442 243 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SMLR1H3BR10 107 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 WRBO00258 174 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SLC31A2O15432 143 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 FCN3O75636 299 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SNAPC5O75971 98 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 PAX1P15863 534 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SLC25A16P16260 332 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 EPHA1P21709 976 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 VDAC1P21796 283 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 COX7A1P24310 79 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 NUP62P37198 522 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 RAB13P51153 203 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 NKX2-5P52952 324 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SRSF4Q08170 494 aaKnown RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF816Q0VGE8 651 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 C2orf68Q2NKX9 166 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 RPL39P5Q59GN2 51 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 OR2B11Q5JQS5 317 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 NCR3LG1Q68D85 454 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 SP5Q6BEB4 398 aaPredicted RBP4.89□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF841Q6ZN19 808 aa4.89□□□□□ -1.63
HMGB3-202ENST00000419110 FAM219AQ8IW50 185 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms