RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 CST11Q9H112 138 aa11.87□□□□□ -0.51
CPNE1-208ENST00000414711 RANGRFQ9HD47 186 aaPredicted RBP11.87□□□□□ -0.51
CPNE1-208ENST00000414711 TMEM138Q9NPI0 162 aa11.87□□□□□ -0.51
CPNE1-208ENST00000414711 HSPG2P98160 4391 aa11.87□□□□□ -0.51
CPNE1-208ENST00000414711 TRAV8-7A0A075B6U6 113 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 CCDC160A6NGH7 325 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 CSN3P07498 182 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 RBP2P50120 134 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 PSMD7P51665 324 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 ATP1B3P54709 279 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 LSM3P62310 102 aaKnown RBP11.86□□□□□ -0.51
CPNE1-208ENST00000414711 TPRA1Q86W33 373 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 LINC00311Q8N616 119 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 NKAIN3Q8N8D7 197 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 ORAI1Q96D31 301 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 SLC23A1Q9UHI7 598 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 A3GALT2U3KPV4 340 aa11.86□□□□□ -0.51
CPNE1-208ENST00000414711 IGKV1-9A0A0C4DH69 117 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 MAS1P04201 325 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 CRIP2P52943 208 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-208ENST00000414711 CTF1Q16619 201 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 CDH26Q8IXH8 852 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 OR2K2Q8NGT1 345 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 NAA50Q9GZZ1 169 aaKnown RBP11.85□□□□□ -0.51
CPNE1-208ENST00000414711 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
CPNE1-208ENST00000414711 IGKV1-12A0A0C4DH73 117 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 ZNF701M0R085 212 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-208ENST00000414711 DEGS1O15121 323 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 SLC22A1O15245 554 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 KDM4BO94953 1096 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 IGKV1D-12P01611 117 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 RANBP1P43487 201 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 MTCP1P56278 107 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 ACTBP60709 375 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 VBP1P61758 197 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 PDZK1IP1Q13113 114 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 LSAMPQ13449 338 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 GLT8D1Q68CQ7 371 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 LIN54Q6MZP7 749 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 LRRTM1Q86UE6 522 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 C8orf31Q8N9H6 132 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 OR51A2Q8NGJ7 313 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
CPNE1-208ENST00000414711 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 NBR2O15453 112 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 CDRT1O95170 752 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 RAB3BP20337 219 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 SDC2P34741 201 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-208ENST00000414711 NCS1P62166 190 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 KISS1Q15726 138 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 C5orf64Q2M2E5 130 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 PAN3Q58A45 887 aaKnown RBP11.83□□□□□ -0.52
CPNE1-208ENST00000414711 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 TMEM217Q8N7C4 229 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 GPER1Q99527 375 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 RBM38Q9H0Z9 239 aaKnown RBP11.83□□□□□ -0.52
CPNE1-208ENST00000414711 SLA2Q9H6Q3 261 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 RNF167Q9H6Y7 350 aa11.83□□□□□ -0.52
CPNE1-208ENST00000414711 RSL24D1Q9UHA3 163 aaKnown RBP11.83□□□□□ -0.52
CPNE1-208ENST00000414711 TRAV39A0A0B4J263 110 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 SDCBPO00560 298 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 XRCC3O43542 346 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 CSTBP04080 98 aaKnown RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 SERPINB10P48595 397 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 MECP2P51608 486 aaKnown RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ZNF137PP52743 207 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 CD300EQ496F6 205 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ACTBL2Q562R1 376 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 RSBN1Q5VWQ0 802 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 JAGN1Q8N5M9 183 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 RFT1Q96AA3 541 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 RNF183Q96D59 192 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 DGCR14Q96DF8 476 aaKnown RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ZNF251Q9BRH9 671 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 UQCC2Q9BRT2 126 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 BARHL1Q9BZE3 327 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 FAM192AQ9GZU8 254 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ADAM30Q9UKF2 790 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 AK6Q9Y3D8 172 aaKnown RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 V9GY05 133 aa11.82□□□□□ -0.52
CPNE1-208ENST00000414711 DMBT1Q9UGM3 2413 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-208ENST00000414711 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 H3BMQ9 156 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 TRGV3P03979 118 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 CD40LGP29965 261 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 BMI1P35226 326 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 MXD1Q05195 221 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 SLC25A48Q6ZT89 311 aaKnown RBP11.81□□□□□ -0.52
CPNE1-208ENST00000414711 CROCCP3Q8IVE0 287 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 MAPKAPK5-AS1Q8N8E1 139 aa11.81□□□□□ -0.52
CPNE1-208ENST00000414711 RITA1Q96K30 269 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms