RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OR8H1Q8NGG4 311 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GINS4Q9BRT9 223 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MRPS26Q9BYN8 205 aaKnown RBP11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR2D2Q9H210 308 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 DCSTAMPQ9H295 470 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 DIABLOQ9NR28 239 aa11.13□□□□□ -0.63
HLA-DQB1-202ENST00000399079 H0YJW9 148 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TMEM127O75204 238 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 DIRAS3O95661 229 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FCER2P06734 321 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 CTF1Q16619 201 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ANKRD13BQ86YJ7 626 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 H1FOOQ8IZA3 346 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GVQW1Q8N7I0 195 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR5AN1Q8NGI8 311 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SDHAF2Q9NX18 166 aa11.12□□□□□ -0.63
HLA-DQB1-202ENST00000399079 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR5H14A6NHG9 310 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 A6NJ64 397 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 H7C2Y5 167 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 J3QRK9 145 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 SOX6P35712 828 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 UBE2NLQ5JXB2 153 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NDUFA11Q86Y39 141 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 STPG2Q8N412 459 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 S100A16Q96FQ6 103 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TCRBV4S1A1TA0A5B7 111 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 M0R1X1 148 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NBR2O15453 112 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 XRCC3O43542 346 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GABARAPO95166 117 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 IGKV1-16P04430 117 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NFYAP23511 347 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MC5RP33032 325 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FOXRED2Q8IWF2 684 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NPBQ8NG41 125 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 CHPT1Q8WUD6 406 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 COMMD3Q9UBI1 195 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ZNF107Q9UII5 783 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 WASHC3Q9Y3C0 194 aa11.1□□□□□ -0.63
HLA-DQB1-202ENST00000399079 MEIS3P1A6NDR6 274 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 AP4M1O00189 453 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 EIF4EP06730 217 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 KHDC1LQ5JSQ8 128 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 BEST4Q8NFU0 473 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NDUFA3O95167 84 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TMEM69Q5SWH9 247 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 CNIH2Q6PI25 160 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GPR141Q7Z602 305 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 FBXL15Q9H469 300 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 KIAA1456Q9P272 454 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 GAB2Q9UQC2 676 aa11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 TSSC4Q9Y5U2 329 aaPredicted RBP11.09□□□□□ -0.63
HLA-DQB1-202ENST00000399079 NOTCH1P46531 2555 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGKV1D-13A0A0B4J2D9 117 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 FCN1O00602 326 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 KCNAB3O43448 404 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OPN1MWP04001 364 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 CTXN2P0C2S0 81 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OPN1MW2P0DN77 364 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OPN1MW3P0DN78 364 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGKV1-13P0DP09 117 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RORCP51449 518 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 TAS2R20P59543 309 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 LIN54Q6MZP7 749 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 LCNL1Q6ZST4 164 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 OR2W1Q9Y3N9 320 aa11.08□□□□□ -0.64
HLA-DQB1-202ENST00000399079 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RRHO14718 337 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 HLA-DRB1P01911 266 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 APOA2P02652 100 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ARPC4P59998 168 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RPS16P62249 146 aaKnown RBP11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SLC35B1P78383 322 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PLGLAQ15195 96 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 C18orf65Q6ZTR6 163 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 SLC35D1Q9NTN3 355 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 PLXNB1O43157 2135 aa11.07□□□□□ -0.64
HLA-DQB1-202ENST00000399079 LINC00473A8K010 186 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 G3V318 75 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 ATP6V0E1O15342 81 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 HPGDSO60760 199 aa11.06□□□□□ -0.64
HLA-DQB1-202ENST00000399079 RBBP9O75884 186 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms