RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 LINC00205P59089 165 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 CFHR3Q02985 330 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 MMDQ15546 238 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 PNLIPRP3Q17RR3 467 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 GLDNQ6ZMI3 551 aaPredicted RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 OR10J5Q8NHC4 309 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 NUDCD2Q8WVJ2 157 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 RASL11BQ9BPW5 248 aa13.14□□□□□ -0.31
APTR-201ENST00000398043 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 TSSC4Q9Y5U2 329 aaPredicted RBP13.14□□□□□ -0.31
APTR-201ENST00000398043 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 TCRBV4S1A1TA0A5B7 111 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 A6NJ64 397 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 NBR2O15453 112 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 KCNAB3O43448 404 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 IGF1P05019 195 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 MC5RP33032 325 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 SOX6P35712 828 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 TALDO1P37837 337 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 PITPNAQ00169 270 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 CROCCP3Q8IVE0 287 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 FOXRED2Q8IWF2 684 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 ZNF383Q8NA42 475 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 DRAXINQ8NBI3 349 aaPredicted RBP13.13□□□□□ -0.31
APTR-201ENST00000398043 OR4F17Q8NGA8 305 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
APTR-201ENST00000398043 A0A1W2PRX2 142 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 HLA-DRB1P01911 266 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 OR8U9P0C7N5 309 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 C5orf64Q2M2E5 130 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 OR8U1Q8NH10 309 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 R3HDM4Q96D70 268 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 SDHAF2Q9NX18 166 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
APTR-201ENST00000398043 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 RBBP9O75884 186 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 IGKV1-16P04430 117 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 NCS1P62166 190 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 SLC25A46Q96AG3 418 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 RNF5Q99942 180 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 OR2D2Q9H210 308 aa13.11□□□□□ -0.31
APTR-201ENST00000398043 RRHO14718 337 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 TFAP2AP05549 437 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 GNG2P59768 71 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 RPL23AP62750 156 aaKnown RBP13.1□□□□□ -0.31
APTR-201ENST00000398043 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 CNIH2Q6PI25 160 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 AUNIPQ9H7T9 357 aa13.1□□□□□ -0.31
APTR-201ENST00000398043 M0R1X1 148 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 IGHG4P01861 327 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 CTXN2P0C2S0 81 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 PPIFP30405 207 aaKnown RBP13.09□□□□□ -0.31
APTR-201ENST00000398043 CRIP2P52943 208 aaPredicted RBP13.09□□□□□ -0.31
APTR-201ENST00000398043 VBP1P61758 197 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 SLC35B1P78383 322 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 NDPQ00604 133 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 CTF1Q16619 201 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 C19orf54Q5BKX5 351 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 ETV3LQ6ZN32 361 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 ANKRD13BQ86YJ7 626 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 PDPNQ86YL7 162 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 DDB2Q92466 427 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 GINS4Q9BRT9 223 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 NAA50Q9GZZ1 169 aaKnown RBP13.09□□□□□ -0.31
APTR-201ENST00000398043 OR51J1Q9H342 316 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 FBXL15Q9H469 300 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 DIABLOQ9NR28 239 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 ANXA10Q9UJ72 324 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 FBXO7Q9Y3I1 522 aa13.09□□□□□ -0.31
APTR-201ENST00000398043 H7C2Y5 167 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 FCN1O00602 326 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 ATP6V0E1O15342 81 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 WIPF1O43516 503 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 XRCC3O43542 346 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 TUSC2O75896 110 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 GABARAPO95166 117 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 IGLV2-14P01704 120 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 IGLV2-23P01705 113 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 HLA-DQB1P01920 261 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 PTHLHP12272 177 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 ALDH3B2P48448 385 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 DEFA6Q01524 100 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 FOXE3Q13461 319 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 PSG5Q15238 335 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 UBE2NLQ5JXB2 153 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 KPRPQ5T749 579 aaPredicted RBP13.08□□□□□ -0.32
APTR-201ENST00000398043 TEX38Q6PEX7 206 aa13.08□□□□□ -0.32
APTR-201ENST00000398043 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms