RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 GPR12P47775 334 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 GNG10P50151 68 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 NCR3LG1Q68D85 454 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF66Q6ZN08 573 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF695Q8IW36 515 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF596Q8TC21 504 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 LIN7CQ9NUP9 197 aaKnown RBP12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 HSPB11Q9Y547 144 aa12.85□□□□□ -0.35
NIPAL3-204ENST00000374399 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 CENPEQ02224 2701 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 SAA2-SAA4A0A096LPE2 208 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 IGKV1-5P01602 117 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 SAA2P0DJI9 122 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 IGHV1-8P0DP01 117 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 PSMB6P28072 239 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 RAB7AP51149 207 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 DLX1P56177 255 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 CYCSP99999 105 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 BPESC1Q9GZL8 116 aa12.84□□□□□ -0.35
NIPAL3-204ENST00000374399 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 KIAA1324LA8MWY0 1029 aaPredicted RBP12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 IFNA21P01568 189 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 RAB32Q13637 225 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 DDB2Q92466 427 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 HSD17B10Q99714 261 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 MED13LQ71F56 2210 aa12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-204ENST00000374399 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 PPIAL4CA0A0B4J2A2 164 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 J3QKU1 62 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 IGHV2-5P01817 119 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 SERPINE2P07093 398 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 PPIAL4GP0DN37 164 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 LYL1P12980 280 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 VDAC1P21796 283 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 FGL1Q08830 312 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 OR2B11Q5JQS5 317 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 Q6ZRM9 215 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 OR5AC2Q9NZP5 309 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 MBD2Q9UBB5 411 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 M0R1X1 148 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 RAB29O14966 203 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 ARPC5O15511 151 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 KCNAB3O43448 404 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 P0C879 139 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 ZFP36P26651 326 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 SSTR2P30874 369 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 LPAR6P43657 344 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 LMO4P61968 165 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 GNB2P62879 340 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 IZUMO4Q1ZYL8 232 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 LYG1Q8N1E2 194 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 Q8N7P7 452 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 C8orf31Q8N9H6 132 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 RBMXL1Q96E39 390 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 FAM212BQ9NTI7 297 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 COMMD9Q9P000 198 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 TNFSF18Q9UNG2 199 aa12.82□□□□□ -0.36
NIPAL3-204ENST00000374399 RNF222A6NCQ9 220 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 S1PR2O95136 353 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 KRTAP10-9P60411 292 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 PAX2Q02962 417 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 CATR1Q13166 79 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 SPAG16Q8N0X2 631 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 SESN1Q9Y6P5 492 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 DOPEY2Q9Y3R5 2298 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 NBPF19A0A087WUL8 3843 aa12.81□□□□□ -0.36
NIPAL3-204ENST00000374399 ABCA2Q9BZC7 2435 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 J3QR06 171 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 PITX3O75364 302 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 PAX1P15863 534 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 RPA2P15927 270 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 PRB3Q04118 309 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF816Q0VGE8 651 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF833PQ6ZTB9 187 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF546Q86UE3 836 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 TCTEX1D1Q8N7M0 179 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 ZNF383Q8NA42 475 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 CLDND2Q8NHS1 167 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 LSM10Q969L4 123 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 TMEM133Q9H2Q1 129 aa12.8□□□□□ -0.36
NIPAL3-204ENST00000374399 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 RBP4P02753 201 aa12.79□□□□□ -0.36
NIPAL3-204ENST00000374399 PDLIM4P50479 330 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms