RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 UBE2UQ5VVX9 321 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 C11orf87Q6NUJ2 197 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 SPARTQ8N0X7 666 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.56□□□□□ -0.4
VMA21-202ENST00000370361 OR56B1Q8NGI3 324 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 TSNAXQ99598 290 aaKnown RBP12.56□□□□□ -0.4
VMA21-202ENST00000370361 AGMATQ9BSE5 352 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 NICN1Q9BSH3 213 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 KCNK15Q9H427 330 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 NDUFB11Q9NX14 153 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
VMA21-202ENST00000370361 WSB1Q9Y6I7 421 aa12.56□□□□□ -0.4
VMA21-202ENST00000370361 G3V318 75 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 CT45A6P0DMU7 189 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 CT45A5P0DMU8 189 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 CT45A7P0DMV0 189 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 CNTFRP26992 372 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
VMA21-202ENST00000370361 P2RY14Q15391 338 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 C19orf54Q5BKX5 351 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 PDPNQ86YL7 162 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 SLA2Q9H6Q3 261 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 AK3Q9UIJ7 227 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 SCOCQ9UIL1 159 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 ZNF221Q9UK13 617 aa12.55□□□□□ -0.4
VMA21-202ENST00000370361 A0A0A6YYD4 124 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 H7C2Y5 167 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 APOA2P02652 100 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 GALP22466 123 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 CEACAM6P40199 344 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 CX3CL1P78423 397 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
VMA21-202ENST00000370361 ZNF562Q6V9R5 426 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 RITA1Q96K30 269 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
VMA21-202ENST00000370361 GNB4Q9HAV0 340 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 Q9N2K0 584 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 NUBP2Q9Y5Y2 271 aa12.54□□□□□ -0.4
VMA21-202ENST00000370361 TRAV1-2A0A0B4J238 106 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 TRDV1A0A1B0GX56 115 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 A0A1W2PN81 502 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
VMA21-202ENST00000370361 LINC01619G3V211 115 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 OVOL1O14753 267 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 SOCS1O15524 211 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 TFAP2AP05549 437 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
VMA21-202ENST00000370361 CHRNA7P36544 502 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 ECSCRQ19T08 205 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 RPL39P5Q59GN2 51 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 FCGR1BQ92637 280 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 FAM3DQ96BQ1 224 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
VMA21-202ENST00000370361 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
VMA21-202ENST00000370361 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 RAB22AQ9UL26 194 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 U3KQK5 164 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 V9GY05 133 aa12.53□□□□□ -0.4
VMA21-202ENST00000370361 SHISA3A0PJX4 238 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 TRDCB7Z8K6 153 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 H3BUA1 57 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 PDCD5O14737 125 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 GNB1P62873 340 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 NDPQ00604 133 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 CBX3Q13185 183 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 ACTBL2Q562R1 376 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 ZNF773Q6PK81 442 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 OR6Q1Q8NGQ2 317 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 ABHD5Q8WTS1 349 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 ABHD14BQ96IU4 210 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 TMEM68Q96MH6 324 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 PECRQ9BY49 303 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 METTL1Q9UBP6 276 aaKnown RBP12.52□□□□□ -0.41
VMA21-202ENST00000370361 GAB2Q9UQC2 676 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
VMA21-202ENST00000370361 OR8U9P0C7N5 309 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 GADD45AP24522 165 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 PSMB9P28065 219 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 LGALS7P47929 136 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 VEGFCP49767 419 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 TMEM50BP56557 158 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 CLDN12P56749 244 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 ARL6IP1Q15041 203 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 MOGAT2Q3SYC2 334 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 PPP1R27Q86WC6 154 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 ARHGAP5-AS1Q96IT6 56 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 PRR25Q96S07 402 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 OR1A1Q9P1Q5 309 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 TENM3Q9P273 2699 aa12.51□□□□□ -0.41
VMA21-202ENST00000370361 LDLRAD4O15165 306 aa12.5□□□□□ -0.41
VMA21-202ENST00000370361 HSPB1P04792 205 aaKnown RBP12.5□□□□□ -0.41
VMA21-202ENST00000370361 SCTP09683 121 aa12.5□□□□□ -0.41
VMA21-202ENST00000370361 CD3GP09693 182 aa12.5□□□□□ -0.41
VMA21-202ENST00000370361 OR10A3P58181 314 aa12.5□□□□□ -0.41
VMA21-202ENST00000370361 PSG5Q15238 335 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms