RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 GADD45AP24522 165 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 SDC2P34741 201 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 NDPQ00604 133 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 KCTD21Q4G0X4 260 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 TPRA1Q86W33 373 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 RNF152Q8N8N0 203 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 KCTD7Q96MP8 289 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 DUX3Q96PT4 197 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 CHCHD6Q9BRQ6 235 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
HMGN3-201ENST00000275036 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 METTL21EPA6NDL7 271 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 G3V318 75 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 K7EIL1 84 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 BET1O15155 118 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 RRP9O43818 475 aaKnown RBP11.28□□□□□ -0.6
HMGN3-201ENST00000275036 IGHG4P01861 327 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
HMGN3-201ENST00000275036 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
HMGN3-201ENST00000275036 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
HMGN3-201ENST00000275036 MXD1Q05195 221 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 FOXE3Q13461 319 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
HMGN3-201ENST00000275036 P2RX4Q99571 388 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 CENPOQ9BU64 300 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
HMGN3-201ENST00000275036 LOC100506127A0A0U1RQW1 187 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 FCN1O00602 326 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 RRHO14718 337 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 ELANEP08246 267 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 CD36P16671 472 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 VDAC1P21796 283 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 PSMB8P28062 276 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 MC5RP33032 325 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 CDNFQ49AH0 187 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
HMGN3-201ENST00000275036 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGN3-201ENST00000275036 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 KIAA1456Q9P272 454 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 ZNF221Q9UK13 617 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
HMGN3-201ENST00000275036 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 H7C2Y5 167 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 OR8U9P0C7N5 309 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 SLC6A1P30531 599 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 MYCNOSP40205 109 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
HMGN3-201ENST00000275036 SERPINB10P48595 397 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
HMGN3-201ENST00000275036 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 Q6ZS49 121 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 OR5H6Q8NGV6 325 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 OR8U1Q8NH10 309 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 OR10J5Q8NHC4 309 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 SDHAF2Q9NX18 166 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
HMGN3-201ENST00000275036 M0R1X1 148 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 RBBP9O75884 186 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 DIRAS3O95661 229 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 TFAP2AP05549 437 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 GSTP1P09211 210 aaKnown RBP11.25□□□□□ -0.61
HMGN3-201ENST00000275036 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
HMGN3-201ENST00000275036 TGFBR1P36897 503 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 PSG5Q15238 335 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 SRSF7Q16629 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
HMGN3-201ENST00000275036 HACD4Q5VWC8 232 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
HMGN3-201ENST00000275036 NUDCD2Q8WVJ2 157 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 SLC25A38Q96DW6 304 aa11.25□□□□□ -0.61
HMGN3-201ENST00000275036 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
HMGN3-201ENST00000275036 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
HMGN3-201ENST00000275036 CCL24O00175 119 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms