RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 RNF5Q99942 180 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 AUNIPQ9H7T9 357 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 WASHC3Q9Y3C0 194 aa19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 RBM7Q9Y580 266 aaKnown RBP19.27■□□□□ 0.68
SDF2L1-201ENST00000248958 IGKV1D-8A0A087WSZ0 117 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 PSMB11A5LHX3 300 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 H0YJW9 148 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 AP4M1O00189 453 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 SSX5O60225 188 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 OR8U9P0C7N5 309 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 SOX6P35712 828 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 CD83Q01151 205 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 FAM131AQ6UXB0 335 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 SAMD12Q8N8I0 201 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 OR8U1Q8NH10 309 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 CITED2Q99967 270 aaPredicted RBP19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 GON7Q9BXV9 100 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 OR2D2Q9H210 308 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 KIAA1456Q9P272 454 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 ANXA10Q9UJ72 324 aa19.26■□□□□ 0.67
SDF2L1-201ENST00000248958 NBR2O15453 112 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 PROP1O75360 226 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 CBX5P45973 191 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 RORCP51449 518 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 SLC35B1P78383 322 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 CTF1Q16619 201 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 COMMD1Q8N668 190 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 NPBQ8NG41 125 aa19.25■□□□□ 0.67
SDF2L1-201ENST00000248958 H7C2Y5 167 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 NDUFA3O95167 84 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 TSPAN15O95858 294 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 APOA2P02652 100 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 TAGLNQ01995 201 aaKnown RBP19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 GPR107Q5VW38 600 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 GLDNQ6ZMI3 551 aaPredicted RBP19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 STPG2Q8N412 459 aa19.24■□□□□ 0.67
SDF2L1-201ENST00000248958 M0R1X1 148 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 NSUN5P1Q3KNT7 163 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 HOGA1Q86XE5 327 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 PDPNQ86YL7 162 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 BEST4Q8NFU0 473 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 OR4F17Q8NGA8 305 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 OR4F4Q96R69 305 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 SDHAF2Q9NX18 166 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 ZNF107Q9UII5 783 aaPredicted RBP19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 ZNF580Q9UK33 172 aa19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 TSSC4Q9Y5U2 329 aaPredicted RBP19.23■□□□□ 0.67
SDF2L1-201ENST00000248958 TCRBV4S1A1TA0A5B7 111 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 SLC22A5O76082 557 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 TMEM69Q5SWH9 247 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 AP3S1Q92572 193 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 RITA1Q96K30 269 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 NAA50Q9GZZ1 169 aaKnown RBP19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 COMMD3Q9UBI1 195 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 OR2W1Q9Y3N9 320 aa19.22■□□□□ 0.67
SDF2L1-201ENST00000248958 HLA-DRB1P01911 266 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 APOA1P02647 267 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 ARPC4P59998 168 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 C5orf64Q2M2E5 130 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 LIN54Q6MZP7 749 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 MZT2AQ6P582 158 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 ZNF383Q8NA42 475 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 DRAXINQ8NBI3 349 aaPredicted RBP19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 ADTRPQ96IZ2 230 aa19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 NOL4LQ96MY1 436 aaPredicted RBP19.21■□□□□ 0.67
SDF2L1-201ENST00000248958 SMIM31A0A1B0GVY4 71 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 HLA-DQB1P01920 261 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 CNTFRP26992 372 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 THBS3P49746 956 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 LUMP51884 338 aaPredicted RBP19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 TAS2R20P59543 309 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 CBX3Q13185 183 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 FAM110DQ8TAY7 271 aaPredicted RBP19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 RBMXL1Q96E39 390 aaKnown RBP19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 TSNAXQ99598 290 aaKnown RBP19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 SLC35D1Q9NTN3 355 aa19.2■□□□□ 0.66
SDF2L1-201ENST00000248958 LINC01548A6NM66 108 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 ADARB2-AS1A8MUL3 147 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 RRHO14718 337 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 SPDEFO95238 335 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 IGF1P05019 195 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 OR5H8P0DN80 308 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 RRASP10301 218 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 ZNF182P17025 639 aaPredicted RBP19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 TCTEX1D4Q5JR98 221 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 HIST2H2BDQ6DRA6 164 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 ZNF329Q86UD4 541 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 ZNF645Q8N7E2 425 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 FLYWCH2Q96CP2 140 aaKnown RBP19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 HSPB9Q9BQS6 159 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 NECAP2Q9NVZ3 263 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 LINC00527Q9UJ94 153 aa19.19■□□□□ 0.66
SDF2L1-201ENST00000248958 NFYAP23511 347 aaPredicted RBP19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 TEX38Q6PEX7 206 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 C10orf99Q6UWK7 81 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 GVQW1Q8N7I0 195 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 R3HDM4Q96D70 268 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 BCL7BQ9BQE9 202 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 IFT46Q9NQC8 304 aa19.18■□□□□ 0.66
SDF2L1-201ENST00000248958 ZFP57Q9NU63 452 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms