RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Pard6gQ9JK84 382 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Slurp1Q9Z0K7 110 aa17.94■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr1039A2ARY0 319 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr1109A2AT96 312 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm17026K7N6Z0 213 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Tacr3P47937 452 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 ArsbP50429 534 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Fam219bQ14DQ1 197 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Tex30Q3TUU5 225 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ceacam10Q61400 265 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ap1s3Q7TN05 154 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp87Q8K2A4 540 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr281Q8VET6 311 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Pdzk1ip1Q9CQH0 114 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 LitafQ9JLJ0 161 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 EdarQ9R187 448 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Bcl2l10Q9Z0F3 191 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Dock11A2AF47 2073 aa17.93■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 FggyA2AJL3 552 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 9830107B12RikD3Z5D6 160 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr902E9Q6Z7 309 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mcpt9O35164 246 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ifna9P09235 190 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cbx3P23198 183 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Anxa7Q07076 463 aaKnown RBP17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Tmem231Q3U284 315 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mccc2Q3ULD5 563 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 TMEM229BQ8BFQ2 167 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Klf17Q8CFA7 341 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 V1ra11Q8R2E6 318 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Znhit1Q8R331 154 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Vmn1r45Q8VIC7 318 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Lap3Q9CPY7 519 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 1700029P11RikQ9CQ68 150 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mbd3l1Q9D9H3 186 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm21858A0A087WQ24 222 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm7970L7N271 213 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm7980L7N471 213 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cxcl13O55038 109 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 GzmbP04187 247 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cdkn1bP46414 197 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Tas2r41P59532 308 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Rras2P62071 204 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 McptlQ00356 246 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Map6d1Q14BB9 191 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 BC147527Q3V185 167 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Rft1Q8C3B8 541 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ubqln3Q8C5U9 658 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gpr84Q8CIM5 396 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr1270Q8VGP3 304 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Atg5Q99J83 275 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mettl21AQ9CQL0 218 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Orc6Q9WUJ8 262 aa17.92■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Pcdhgb8A0A140LI48 931 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 A0A286YDM2 672 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr224M9MMJ7 314 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Atf6bO35451 699 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 StomP54116 284 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Rab3cP62823 227 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Nkx3-1P97436 237 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 PnlipQ6P8U6 465 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp819Q80V81 607 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Tmem17Q8K0U3 198 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Wipi1Q8R3E3 446 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Teddm3Q9CQH1 294 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mpped2Q9CZJ0 294 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Iqcf5Q9DAL7 148 aa17.91■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Nbeal1E9PYP2 2688 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 SonQ9QX47 2444 aaKnown RBP17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr548-ps1A0A1B0GSG0 314 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Vmn2r80E9Q1L0 863 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Zfp961E9Q4R5 444 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr746E9Q840 314 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Glp1rO35659 463 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 H3f3cP02301 136 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 NppaP05125 152 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Htr2aP35363 471 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cyb5aP56395 134 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Nanos2P60322 136 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ifna15Q61718 190 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 EpopQ7TNS8 369 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Prss34Q80UR4 318 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Upk3bQ80YF6 275 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Wdr82Q8BFQ4 313 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 SdhdQ9CXV1 159 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Mpc2Q9D023 127 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Chst5Q9QUP4 395 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cx3cr1Q9Z0D9 354 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ash1lQ99MY8 2958 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Cep250Q60952 2414 aa17.9■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Igkv1-135A0A0B4J1H7 120 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Olfr221B2RVX8 311 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm7951E9Q0A2 213 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm6482F6YHC1 213 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm17124F6ZIG1 213 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Gm20918J3QN17 227 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Ccr6O54689 367 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 SellP18337 372 aa17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 Arpc4P59999 168 aaKnown RBP17.89■□□□□ 0.46
Ccdc88a-202ENSMUST00000109477 N4bp2l1Q3V2Q8 238 aa17.89■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms