RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 GHITMQ9H3K2 345 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 NDUFB11Q9NX14 153 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 ZNF580Q9UK33 172 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 TGP01266 2768 aa19.81■□□□□ 0.76
VEGFA-232ENST00000640653 DNAH3Q8TD57 4116 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 TRAV1-2A0A0B4J238 106 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 ITGB1BP1O14713 200 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 HSPA12AO43301 675 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 ATP6V1G2O95670 118 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 IGF1P05019 195 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 ELANEP08246 267 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 OR5H8P0DN80 308 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 SLC2A2P11168 524 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-232ENST00000640653 ZBTB25P24278 435 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 MYL9P24844 172 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 GABARAPL2P60520 117 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 HES5Q5TA89 166 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 EDARADDQ8WWZ3 215 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 CMSS1Q9BQ75 279 aaKnown RBP19.8■□□□□ 0.76
VEGFA-232ENST00000640653 Q9N2K0 584 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 RAB22AQ9UL26 194 aa19.8■□□□□ 0.76
VEGFA-232ENST00000640653 LDLRAD4O15165 306 aa19.79■□□□□ 0.76
VEGFA-232ENST00000640653 NBR2O15453 112 aa19.79■□□□□ 0.76
VEGFA-232ENST00000640653 MRPS14O60783 128 aaKnown RBP19.79■□□□□ 0.76
VEGFA-232ENST00000640653 RPLP1P05386 114 aaKnown RBP19.79■□□□□ 0.76
VEGFA-232ENST00000640653 CHCHD6Q9BRQ6 235 aa19.79■□□□□ 0.76
VEGFA-232ENST00000640653 KIAA1456Q9P272 454 aa19.79■□□□□ 0.76
VEGFA-232ENST00000640653 TMEM272A0A1B0GTI8 110 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 IGHG4P01861 327 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 CEACAM6P40199 344 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 MRPS15P82914 257 aaKnown RBP19.78■□□□□ 0.76
VEGFA-232ENST00000640653 CFHR3Q02985 330 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 CD200R1LQ6Q8B3 271 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 RNF152Q8N8N0 203 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 DPF1Q92782 380 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 MCRIP2Q9BUT9 160 aaKnown RBP19.78■□□□□ 0.76
VEGFA-232ENST00000640653 Q9H521 79 aa19.78■□□□□ 0.76
VEGFA-232ENST00000640653 TRDV1A0A1B0GX56 115 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 HLA-DRB1P01911 266 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 CNTFRP26992 372 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 RPL39P5Q59GN2 51 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 PLAC9Q5JTB6 97 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 NPBQ8NG41 125 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 RITA1Q96K30 269 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 KCTD7Q96MP8 289 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 P2RX4Q99571 388 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 OR1A1Q9P1Q5 309 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 NOTCH3Q9UM47 2321 aa19.77■□□□□ 0.76
VEGFA-232ENST00000640653 OR5H14A6NHG9 310 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 SCTP09683 121 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 GALP22466 123 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 CDX1P47902 265 aaPredicted RBP19.76■□□□□ 0.75
VEGFA-232ENST00000640653 C5orf64Q2M2E5 130 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 FAM131AQ6UXB0 335 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 LCNL1Q6ZST4 164 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 ABHD14BQ96IU4 210 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 AGMATQ9BSE5 352 aa19.76■□□□□ 0.75
VEGFA-232ENST00000640653 PARP12Q9H0J9 701 aaKnown RBP19.76■□□□□ 0.75
VEGFA-232ENST00000640653 C11orf54Q9H0W9 315 aaPredicted RBP19.76■□□□□ 0.75
VEGFA-232ENST00000640653 IFITM5A6NNB3 132 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 TRDCB7Z8K6 153 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 CCL24O00175 119 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 CD3GP09693 182 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 CT45A6P0DMU7 189 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 CT45A5P0DMU8 189 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 CT45A7P0DMV0 189 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 RAB3BP20337 219 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 MC5RP33032 325 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 OR10A3P58181 314 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 LIN54Q6MZP7 749 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 OR8U1Q8NH10 309 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 PTX4Q96A99 478 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 RAB3CQ96E17 227 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 OR51J1Q9H342 316 aa19.75■□□□□ 0.75
VEGFA-232ENST00000640653 SHISA3A0PJX4 238 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 NDUFA3O95167 84 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 GADD45AP24522 165 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 PLA2G7Q13093 441 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 UBE2UQ5VVX9 321 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 RAX2Q96IS3 184 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 PARP11Q9NR21 331 aa19.74■□□□□ 0.75
VEGFA-232ENST00000640653 IGHV7-81A0A0B4J1V7 117 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 RAB6AP20340 208 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 PSMB8P28062 276 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 KIR2DS1Q14954 304 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 C22orf42Q6IC83 251 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 GLDNQ6ZMI3 551 aaPredicted RBP19.73■□□□□ 0.75
VEGFA-232ENST00000640653 OR4A4PQ8NGN8 299 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 DUX3Q96PT4 197 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 ZNF221Q9UK13 617 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 WASHC3Q9Y3C0 194 aa19.73■□□□□ 0.75
VEGFA-232ENST00000640653 H0YJW9 148 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 H7C2Y5 167 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 ATP6V0E1O15342 81 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 RBBP9O75884 186 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 GSTP1P09211 210 aaKnown RBP19.72■□□□□ 0.75
VEGFA-232ENST00000640653 PSMB9P28065 219 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 SERPINB10P48595 397 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 RAB25P57735 213 aa19.72■□□□□ 0.75
VEGFA-232ENST00000640653 EGFEM1PQ0D2K5 195 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms