RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 POLDIP2Q9Y2S7 368 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 P0C879 139 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 CA6P23280 308 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 MPLP40238 635 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 MAGEA5P43359 124 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
CLN6-215ENST00000636674 ZNF146Q15072 292 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
CLN6-215ENST00000636674 DRAM1Q8N682 238 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 ZNF383Q8NA42 475 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 ZBTB34Q8NCN2 500 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 NANOS1Q8WY41 292 aaKnown RBP12.28□□□□□ -0.44
CLN6-215ENST00000636674 PFDN5Q99471 154 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 DDA1Q9BW61 102 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 RBKSQ9H477 322 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 HSPB7Q9UBY9 170 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 CEP250Q9BV73 2442 aa12.28□□□□□ -0.44
CLN6-215ENST00000636674 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.44
CLN6-215ENST00000636674 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 TMEM250H0YL14 139 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 IL18BPO95998 194 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 TNFRSF9Q07011 255 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 ATP6V1FQ16864 119 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 WDR86Q86TI4 376 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 ABI3Q9P2A4 366 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 KCNS2Q9ULS6 477 aa12.27□□□□□ -0.44
CLN6-215ENST00000636674 MED12LQ86YW9 2145 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 KBTBD11O94819 623 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 MT-CO3P00414 261 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 PGA5P0DJD9 388 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 MEF2BQ02080 365 aaPredicted RBP12.27□□□□□ -0.45
CLN6-215ENST00000636674 OR1C1Q15619 314 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 SPANXN5Q5MJ07 72 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 GFI1BQ5VTD9 330 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 CDPF1Q6NVV7 123 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 FGFRL1Q8N441 504 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 BCL2L2Q92843 193 aaPredicted RBP12.27□□□□□ -0.45
CLN6-215ENST00000636674 HES7Q9BYE0 225 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 PITPNC1Q9UKF7 332 aa12.27□□□□□ -0.45
CLN6-215ENST00000636674 UBE2L5PA0A1B0GUS4 154 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 FAM166BA8MTA8 275 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 SIRPB1O00241 398 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 WDR1O75083 606 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 ZNF737O75373 536 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 MSMO1Q15800 293 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 NCR3LG1Q68D85 454 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 TGIF2LYQ8IUE0 185 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 RPP25LQ8N5L8 163 aaKnown RBP12.26□□□□□ -0.45
CLN6-215ENST00000636674 ZNF645Q8N7E2 425 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 LHX4Q969G2 390 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 SSX3Q99909 188 aa12.26□□□□□ -0.45
CLN6-215ENST00000636674 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
CLN6-215ENST00000636674 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 IGKV1D-33P01593 117 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 IGKV1-33P01594 117 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 PFN1P07737 140 aaKnown RBP12.25□□□□□ -0.45
CLN6-215ENST00000636674 EIF4EBP1Q13541 118 aaPredicted RBP12.25□□□□□ -0.45
CLN6-215ENST00000636674 C9orf152Q5JTZ5 239 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 MCEMP1Q8IX19 187 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 SCCPDHQ8NBX0 429 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 TMEM147Q9BVK8 224 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 SLC39A9Q9NUM3 307 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 PRSS50Q9UI38 385 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 SPTBN4Q9H254 2564 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 TRAV39A0A0B4J263 110 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 MBP02144 154 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 ZNF16P17020 682 aaPredicted RBP12.25□□□□□ -0.45
CLN6-215ENST00000636674 CEACAM6P40199 344 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 ELLP55199 621 aaPredicted RBP12.25□□□□□ -0.45
CLN6-215ENST00000636674 MDP1Q86V88 176 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 MRPL37Q9BZE1 423 aaKnown RBP12.25□□□□□ -0.45
CLN6-215ENST00000636674 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
CLN6-215ENST00000636674 SH2D1BO14796 132 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 CLDN1O95832 211 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 SPINK2P20155 84 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 GABRA6Q16445 453 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 TBC1D28Q2M2D7 210 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 COA6Q5JTJ3 125 aaKnown RBP12.24□□□□□ -0.45
CLN6-215ENST00000636674 FBXW9Q5XUX1 488 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 ACSM6Q6P461 480 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.24□□□□□ -0.45
CLN6-215ENST00000636674 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 PRR18Q8N4B5 295 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 OR5R1Q8NH85 324 aa12.24□□□□□ -0.45
CLN6-215ENST00000636674 PMS2P5A8MQ11 134 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 C1QTNF9BB2RNN3 333 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 DEFA6Q01524 100 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 VWC2Q2TAL6 325 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 TCTEX1D1Q8N7M0 179 aa12.23□□□□□ -0.45
CLN6-215ENST00000636674 RNASEH2CQ8TDP1 164 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms