RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SLC31A2O15432 143 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 XRCC3O43542 346 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 IGKV1D-33P01593 117 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 IGKV1-33P01594 117 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 APOA1P02647 267 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 TFAP2AP05549 437 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 SOX6P35712 828 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 CTF1Q16619 201 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 GPR107Q5VW38 600 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 Q6ZPA2 131 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 SAMD12Q8N8I0 201 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 OR5H6Q8NGV6 325 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
SNRPA1-216ENST00000626000 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 SAA2-SAA4A0A096LPE2 208 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 TMEM235A6NFC5 223 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 SLC22A5O76082 557 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 SAA2P0DJI9 122 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 VDAC2P45880 294 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 REG1BP48304 166 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 TMBIM6P55061 237 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 LSAMPQ13449 338 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 TMEM69Q5SWH9 247 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 CNIH2Q6PI25 160 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 C15orf40Q8WUR7 153 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 EAF1Q96JC9 268 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 CITED1Q99966 193 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 C11orf54Q9H0W9 315 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 RDH8Q9NYR8 311 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 GAB2Q9UQC2 676 aa11.19□□□□□ -0.62
SNRPA1-216ENST00000626000 M0QZ24 198 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 BET1O15155 118 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 KCNAB3O43448 404 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 RBBP9O75884 186 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 TPPPO94811 219 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 ZNF182P17025 639 aaPredicted RBP11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 CD24P25063 80 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 GPR12P47775 334 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 DIAPH2-AS1Q14236 149 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 HERPUD1Q15011 391 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 ODF3L1Q8IXM7 274 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 RNF5Q99942 180 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 ST6GALNAC5Q9BVH7 336 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 GON7Q9BXV9 100 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 LIN7CQ9NUP9 197 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 RBM7Q9Y580 266 aaKnown RBP11.18□□□□□ -0.62
SNRPA1-216ENST00000626000 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 APOA2P02652 100 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 GSTT2P0CG29 244 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 GSTT2BP0CG30 244 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 ARPC4P59998 168 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 CBX3Q13185 183 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 FOXRED2Q8IWF2 684 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 Q8N6K4 173 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 ADTRPQ96IZ2 230 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 NABP2Q9BQ15 211 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 SERTAD4Q9NUC0 356 aa11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 ZNF230Q9UIE0 474 aaPredicted RBP11.17□□□□□ -0.62
SNRPA1-216ENST00000626000 NCBP2LA6PVI3 153 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 TGFBR1P36897 503 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 BLCAPP62952 87 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 HNF4GQ14541 408 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 C2orf68Q2NKX9 166 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 IGSF11Q5DX21 431 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 FAM53AQ6NSI3 398 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 CLVS1Q8IUQ0 354 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 KLHDC1Q8N7A1 406 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 BORCS5Q969J3 196 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 RASL11BQ9BPW5 248 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 MRPL20Q9BYC9 149 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 IFT46Q9NQC8 304 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 NECAP2Q9NVZ3 263 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 KIAA1456Q9P272 454 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
SNRPA1-216ENST00000626000 IGHV3-72A0A0B4J1Y9 119 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 VSIG10L2P0DP72 767 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 RRASP10301 218 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 OR3A3P47888 321 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 HOGA1Q86XE5 327 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 COMMD1Q8N668 190 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.62
SNRPA1-216ENST00000626000 CHPT1Q8WUD6 406 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms