RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 GPR12P47775 334 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 LSAMPQ13449 338 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 ZNF833PQ6ZTB9 187 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 C5orf24Q7Z6I8 188 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 FOXRED2Q8IWF2 684 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 C5orf56Q8N8D9 126 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 OR13F1Q8NGS4 319 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 KCTD12Q96CX2 325 aaKnown RBP15.43■□□□□ 0.06
UPF1-212ENST00000601689 ZNF251Q9BRH9 671 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 ST6GALNAC5Q9BVH7 336 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 RDH8Q9NYR8 311 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 OR1A1Q9P1Q5 309 aa15.43■□□□□ 0.06
UPF1-212ENST00000601689 GSTT2P0CG29 244 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 GSTT2BP0CG30 244 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 RPS19P39019 145 aaKnown RBP15.42■□□□□ 0.06
UPF1-212ENST00000601689 Q6ZS49 121 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 GPR141Q7Z602 305 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 OR4X2Q8NGF9 303 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 C11orf54Q9H0W9 315 aaPredicted RBP15.42■□□□□ 0.06
UPF1-212ENST00000601689 IFI27L2Q9H2X8 130 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 LIN7CQ9NUP9 197 aaKnown RBP15.42■□□□□ 0.06
UPF1-212ENST00000601689 KIAA1456Q9P272 454 aa15.42■□□□□ 0.06
UPF1-212ENST00000601689 ZNF230Q9UIE0 474 aaPredicted RBP15.42■□□□□ 0.06
UPF1-212ENST00000601689 TRAV18A0A075B6X5 111 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 TMEM235A6NFC5 223 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 OR5H14A6NHG9 310 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 KCNAB3O43448 404 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 CSF1P09603 554 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 SLC35B1P78383 322 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 ZNF260Q3ZCT1 412 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 UBE2NLQ5JXB2 153 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 TREML4Q6UXN2 200 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 Q6ZPA2 131 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 SLC35E3Q7Z769 313 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 ODF3L1Q8IXM7 274 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 OR5H6Q8NGV6 325 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 ABHD14BQ96IU4 210 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 NABP2Q9BQ15 211 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 CABLES2Q9BTV7 478 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 GON7Q9BXV9 100 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 MRPL20Q9BYC9 149 aaKnown RBP15.41■□□□□ 0.06
UPF1-212ENST00000601689 WNT10AQ9GZT5 417 aa15.41■□□□□ 0.06
UPF1-212ENST00000601689 SMIM31A0A1B0GVY4 71 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 H7C2Y5 167 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 OPN1MWP04001 364 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 OPN1MW2P0DN77 364 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 OPN1MW3P0DN78 364 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 OR3A3P47888 321 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 RORCP51449 518 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 KRTAP10-3P60369 221 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 VBP1P61758 197 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 CBX3Q13185 183 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 MMDQ15546 238 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 ANKRD13BQ86YJ7 626 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 C11orf44Q8N8P7 122 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.4■□□□□ 0.06
UPF1-212ENST00000601689 OR5AU1Q8NGC0 362 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 CHPT1Q8WUD6 406 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 ACOT12Q8WYK0 555 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 AP3S1Q92572 193 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 SLC25A46Q96AG3 418 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 TOLLIPQ9H0E2 274 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 MMP27Q9H306 513 aa15.4■□□□□ 0.06
UPF1-212ENST00000601689 TRBV6-7A0A0A0MS04 114 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 APOA2P02652 100 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 AMY1AP04745 511 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 AMY2AP04746 511 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 CBX5P45973 191 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 IGSF11Q5DX21 431 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 MZT2AQ6P582 158 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 Q6ZS46 218 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 Q8N6K4 173 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 MAFIPQ8WZ33 124 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 ABCG5Q9H222 651 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 RNF150Q9ULK6 438 aa15.39■□□□□ 0.05
UPF1-212ENST00000601689 ZNF736B4DX44 427 aaPredicted RBP15.38■□□□□ 0.05
UPF1-212ENST00000601689 RBBP9O75884 186 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 TFAP2AP05549 437 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 SMIM18P0DKX4 95 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 SOX6P35712 828 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 TGFBR1P36897 503 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 ARPC4P59998 168 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 ACTBP60709 375 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 NCS1P62166 190 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 TMEM95Q3KNT9 176 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 RPL39P5Q59GN2 51 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 CNIH2Q6PI25 160 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 SAMD12Q8N8I0 201 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 NUDCD2Q8WVJ2 157 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 AGMATQ9BSE5 352 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 WASHC3Q9Y3C0 194 aa15.38■□□□□ 0.05
UPF1-212ENST00000601689 IGKV1-6A0A0C4DH72 117 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 PSMB11A5LHX3 300 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 SH2D7A6NKC9 451 aaPredicted RBP15.37■□□□□ 0.05
UPF1-212ENST00000601689 AP4M1O00189 453 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 XRCC3O43542 346 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 NOL3O60936 208 aaKnown RBP15.37■□□□□ 0.05
UPF1-212ENST00000601689 IGHG2P01859 326 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 OR8U9P0C7N5 309 aa15.37■□□□□ 0.05
UPF1-212ENST00000601689 TAGLNQ01995 201 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms