RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	NOTO	A8MTQ0	251 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948		G3V4G9	280 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	CD3G	P09693	182 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	SAMD5	Q5TGI4	173 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	TPRA1	Q86W33	373 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	FOXRED2	Q8IWF2	684 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	STPG2	Q8N412	459 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	RASL11B	Q9BPW5	248 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	HSPB9	Q9BQS6	159 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	PIPOX	Q9P0Z9	390 aa		12.21	□□□□□ -0.45
PLD3-223	ENST00000600948	TRDC	B7Z8K6	153 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	AP4M1	O00189	453 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	RAB29	O14966	203 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	HSPA12A	O43301	675 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	FCGR3A	P08637	254 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	HIST1H1D	P16402	221 aa	Known RBP	12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	GNB3	P16520	340 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	ZBTB25	P24278	435 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	GADD45A	P24522	165 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	CEACAM6	P40199	344 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	ACTB	P60709	375 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	MMD	Q15546	238 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	NEDD8	Q15843	81 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	RPL39P5	Q59GN2	51 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	EDARADD	Q8WWZ3	215 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	ABHD14B	Q96IU4	210 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	RITA1	Q96K30	269 aa		12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	C11orf54	Q9H0W9	315 aa	Predicted RBP	12.2	□□□□□ -0.46
PLD3-223	ENST00000600948	METTL21EP	A6NDL7	271 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	PF4V1	P10720	104 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	CNTFR	P26992	372 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	SDC2	P34741	201 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	SLC35B1	P78383	322 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	MRPS15	P82914	257 aa	Known RBP	12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	BEAN1	Q3B7T3	259 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	KHDC1L	Q5JSQ8	128 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	OR4A4P	Q8NGN8	299 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	CHCHD6	Q9BRQ6	235 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	CABLES2	Q9BTV7	478 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	GHITM	Q9H3K2	345 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948	RNF167	Q9H6Y7	350 aa		12.19	□□□□□ -0.46
PLD3-223	ENST00000600948		A0A075B6Q4	140 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	FABP7	O15540	132 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	CLEC2L	P0C7M8	214 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	CT45A6	P0DMU7	189 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	CT45A5	P0DMU8	189 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	CT45A7	P0DMV0	189 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	CD36	P16671	472 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	SOX6	P35712	828 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	RPL23A	P62750	156 aa	Known RBP	12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	KPRP	Q5T749	579 aa	Predicted RBP	12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	SFXN4	Q6P4A7	337 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	FAM131A	Q6UXB0	335 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	COMMD1	Q8N668	190 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	PHF21A	Q96BD5	680 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	KCTD7	Q96MP8	289 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	TOLLIP	Q9H0E2	274 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	ATG5	Q9H1Y0	275 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	RDH8	Q9NYR8	311 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	DAPK2	Q9UIK4	370 aa		12.18	□□□□□ -0.46
PLD3-223	ENST00000600948	LOC100506127	A0A0U1RQW1	187 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	OR5H14	A6NHG9	310 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948		H0YJW9	148 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	NBR2	O15453	112 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	PROP1	O75360	226 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	NDUFA3	O95167	84 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	GSTT2	P0CG29	244 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	GSTT2B	P0CG30	244 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	SNRPB	P14678	240 aa	Known RBP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	SERPINB10	P48595	397 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	KIR2DS1	Q14954	304 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	IGSF11	Q5DX21	431 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	WFDC9	Q8NEX5	89 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	NPB	Q8NG41	125 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	LGALS14	Q8TCE9	139 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	MAFIP	Q8WZ33	124 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	CENPO	Q9BU64	300 aa		12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	ZNF107	Q9UII5	783 aa	Predicted RBP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	ELF5	Q9UKW6	265 aa	Predicted RBP	12.17	□□□□□ -0.46
PLD3-223	ENST00000600948	DIRAS3	O95661	229 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	HLA-DRB1	P01911	266 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	PF4	P02776	101 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	IGF1	P05019	195 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	CFHR3	Q02985	330 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	MXD1	Q05195	221 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	ARFRP1	Q13795	201 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	ARL6IP1	Q15041	203 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	C5orf64	Q2M2E5	130 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	CDNF	Q49AH0	187 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	OXLD1	Q5BKU9	147 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	ETV3L	Q6ZN32	361 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	OR5AN1	Q8NGI8	311 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	ZFP57	Q9NU63	452 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	ZNF580	Q9UK33	172 aa		12.16	□□□□□ -0.46
PLD3-223	ENST00000600948	RNF150	Q9ULK6	438 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms