RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 FGF9P31371 208 aaPredicted RBP9.53□□□□□ -0.88
LIG1-217ENST00000599165 LINC00205P59089 165 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 ACTBP60709 375 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 LINC00482Q8N8I6 264 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 RNF152Q8N8N0 203 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 OR2AK2Q8NG84 335 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 OR56B1Q8NGI3 324 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
LIG1-217ENST00000599165 RIMS4Q9H426 269 aaPredicted RBP9.53□□□□□ -0.88
LIG1-217ENST00000599165 TXNL4BQ9NX01 149 aaKnown RBP9.53□□□□□ -0.88
LIG1-217ENST00000599165 ABRACLQ9P1F3 81 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 ELF5Q9UKW6 265 aaPredicted RBP9.53□□□□□ -0.88
LIG1-217ENST00000599165 RAB22AQ9UL26 194 aa9.53□□□□□ -0.88
LIG1-217ENST00000599165 DNAH9Q9NYC9 4486 aa9.52□□□□□ -0.88
LIG1-217ENST00000599165 H0YJW9 148 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 AP4M1O00189 453 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 RGS11O94810 467 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 NDUFA3O95167 84 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 IGF1P05019 195 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 FCGR3AP08637 254 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 CD3GP09693 182 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 RAB3BP20337 219 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 RAB6AP20340 208 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 PSMB9P28065 219 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 PSMD7P51665 324 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 NDPQ00604 133 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 KHDC1LQ5JSQ8 128 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 FAM71F2Q6NXP2 309 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 ZNF773Q6PK81 442 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 FAM131AQ6UXB0 335 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 GLDNQ6ZMI3 551 aaPredicted RBP9.52□□□□□ -0.89
LIG1-217ENST00000599165 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 FOXRED2Q8IWF2 684 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 NPBQ8NG41 125 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 PTX4Q96A99 478 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 C5orf30Q96GV9 206 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 CMSS1Q9BQ75 279 aaKnown RBP9.52□□□□□ -0.89
LIG1-217ENST00000599165 YTHDF1Q9BYJ9 559 aaKnown RBP9.52□□□□□ -0.89
LIG1-217ENST00000599165 TOLLIPQ9H0E2 274 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 OR51E2Q9H255 320 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 RNF167Q9H6Y7 350 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 ZNF580Q9UK33 172 aa9.52□□□□□ -0.89
LIG1-217ENST00000599165 IGKV1D-8A0A087WSZ0 117 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 IGHV7-81A0A0B4J1V7 117 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 PDCD5O14737 125 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 RPLP1P05386 114 aaKnown RBP9.51□□□□□ -0.89
LIG1-217ENST00000599165 PF4V1P10720 104 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 HIST1H1DP16402 221 aaKnown RBP9.51□□□□□ -0.89
LIG1-217ENST00000599165 GNB3P16520 340 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 MYL9P24844 172 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 PPIFP30405 207 aaKnown RBP9.51□□□□□ -0.89
LIG1-217ENST00000599165 CEACAM6P40199 344 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 THBS3P49746 956 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 KIAA0141Q14154 515 aaPredicted RBP9.51□□□□□ -0.89
LIG1-217ENST00000599165 MMDQ15546 238 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 C19orf54Q5BKX5 351 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 FOXB2Q5VYV0 432 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 MRPL41Q8IXM3 137 aaKnown RBP9.51□□□□□ -0.89
LIG1-217ENST00000599165 OR5AN1Q8NGI8 311 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 OR10R2Q8NGX6 335 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 MYOZ3Q8TDC0 251 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 P2RX4Q99571 388 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 RASL11BQ9BPW5 248 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 CABLES2Q9BTV7 478 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 PIPOXQ9P0Z9 390 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 STUB1Q9UNE7 303 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 TNCP24821 2201 aa9.51□□□□□ -0.89
LIG1-217ENST00000599165 TRDCB7Z8K6 153 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 G3V318 75 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 RAB29O14966 203 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 NBR2O15453 112 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 IGHG4P01861 327 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 HLA-DRB1P01911 266 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 CLEC2LP0C7M8 214 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 GSTT2P0CG29 244 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 GSTT2BP0CG30 244 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 ZBTB25P24278 435 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 PSMB8P28062 276 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 SOX6P35712 828 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 PNLIPRP3Q17RR3 467 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 C5orf64Q2M2E5 130 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 COMMD1Q8N668 190 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 ZNF383Q8NA42 475 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 DRAXINQ8NBI3 349 aaPredicted RBP9.5□□□□□ -0.89
LIG1-217ENST00000599165 MAFIPQ8WZ33 124 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 RAX2Q96IS3 184 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 DUX3Q96PT4 197 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 Q9H521 79 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 ZFP57Q9NU63 452 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 AURKAIP1Q9NWT8 199 aaPredicted RBP9.5□□□□□ -0.89
LIG1-217ENST00000599165 RDH8Q9NYR8 311 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 ZNF230Q9UIE0 474 aaPredicted RBP9.5□□□□□ -0.89
LIG1-217ENST00000599165 RNF150Q9ULK6 438 aa9.5□□□□□ -0.89
LIG1-217ENST00000599165 TRBV6-7A0A0A0MS04 114 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 NOTOA8MTQ0 251 aa9.49□□□□□ -0.89
LIG1-217ENST00000599165 FCN1O00602 326 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms