RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 IGHG4P01861 327 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 RPS19P39019 145 aaKnown RBP10.59□□□□□ -0.71
SS18-222ENST00000582792 REG1BP48304 166 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 SERPINB10P48595 397 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 INSL3P51460 131 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 CLDN12P56749 244 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 NCS1P62166 190 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 LSM3P62310 102 aaKnown RBP10.59□□□□□ -0.71
SS18-222ENST00000582792 CFHR3Q02985 330 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 MXD1Q05195 221 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 SIGIRRQ6IA17 410 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 OR10K2Q6IF99 312 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 GAPTQ8N292 157 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 OR56B1Q8NGI3 324 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 FAM46BQ96A09 425 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 SLC25A46Q96AG3 418 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
SS18-222ENST00000582792 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 NEDD4LQ96PU5 975 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 PLSCR3Q9NRY6 295 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 DAPK2Q9UIK4 370 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 HSF4Q9ULV5 492 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 PEX16Q9Y5Y5 336 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
SS18-222ENST00000582792 METTL21EPA6NDL7 271 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
SS18-222ENST00000582792 SCGNO76038 276 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 LY86O95711 162 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 SLC2A2P11168 524 aaPredicted RBP10.58□□□□□ -0.72
SS18-222ENST00000582792 VBP1P61758 197 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 RAB12Q6IQ22 244 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 CLVS1Q8IUQ0 354 aaPredicted RBP10.58□□□□□ -0.72
SS18-222ENST00000582792 SBSPONQ8IVN8 264 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 NAA50Q9GZZ1 169 aaKnown RBP10.58□□□□□ -0.72
SS18-222ENST00000582792 KCNK15Q9H427 330 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 SPATA2Q9UM82 520 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 LYSTQ99698 3801 aa10.58□□□□□ -0.72
SS18-222ENST00000582792 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 TRAV39A0A0B4J263 110 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 TMEM30CPA0ZSE6 113 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 VDAC1P21796 283 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 PSMB8P28062 276 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 CD1BP29016 333 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
SS18-222ENST00000582792 TGFBR1P36897 503 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 ARL6IP1Q15041 203 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 ZNF497Q6ZNH5 498 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 OR8H1Q8NGG4 311 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 RTN4IP1Q8WWV3 396 aaPredicted RBP10.57□□□□□ -0.72
SS18-222ENST00000582792 ACOT12Q8WYK0 555 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 S1PR3Q99500 378 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 RASL11BQ9BPW5 248 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 HSPB9Q9BQS6 159 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 RIMS4Q9H426 269 aaPredicted RBP10.57□□□□□ -0.72
SS18-222ENST00000582792 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 SORL1Q92673 2214 aa10.57□□□□□ -0.72
SS18-222ENST00000582792 DNAH1Q9P2D7 4330 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 A0A0A6YYH2 397 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 LCE6AA0A183 80 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 SMIM30A4D0T7 59 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 A6NJ64 397 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 NOL3O60936 208 aaKnown RBP10.56□□□□□ -0.72
SS18-222ENST00000582792 MOSP00540 346 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 MT-ND4P03905 459 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 IGF1P05019 195 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 OR8U8P0C7N1 319 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 LYL1P12980 280 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 GZMHP20718 246 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 RORCP51449 518 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 TMEM50BP56557 158 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 IDNKQ5T6J7 187 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 ZNF554Q86TJ5 538 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 FAM71E2Q8N5Q1 922 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 C8orf31Q8N9H6 132 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 OR52M1Q8NGK5 317 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 CMTM3Q96MX0 182 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 NICN1Q9BSH3 213 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 DCSTAMPQ9H295 470 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 PLEKHJ1Q9NW61 149 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 ETAA1Q9NY74 926 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 CEPT1Q9Y6K0 416 aa10.56□□□□□ -0.72
SS18-222ENST00000582792 CSMD3Q7Z407 3707 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 TRBV6-6A0A0A6YYG2 114 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 A0A0B4J203 849 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 ZNF701M0R085 212 aaPredicted RBP10.55□□□□□ -0.72
SS18-222ENST00000582792 RAB27BO00194 218 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 SOCS1O15524 211 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 ORC5O43913 435 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 OR5H8P0DN80 308 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
SS18-222ENST00000582792 IL3RAP26951 378 aa10.55□□□□□ -0.72
SS18-222ENST00000582792 SOX6P35712 828 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms