RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SOX6P35712 828 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 MNDAP41218 407 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 RAG2P55895 527 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 EBI3Q14213 229 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 AWAT1Q58HT5 328 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 LIAT1Q6ZQX7 453 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 THNSL2Q86YJ6 484 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 H1FOOQ8IZA3 346 aaPredicted RBP13.12□□□□□ -0.31
RNF43-206ENST00000582293 C5orf30Q96GV9 206 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
RNF43-206ENST00000582293 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
RNF43-206ENST00000582293 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
RNF43-206ENST00000582293 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
RNF43-206ENST00000582293 TSPAN9O75954 239 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
RNF43-206ENST00000582293 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 Q6ZS46 218 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 TGIF2LXQ8IUE1 241 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 Q8N6K4 173 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 NABP2Q9BQ15 211 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 MRPL20Q9BYC9 149 aaKnown RBP13.11□□□□□ -0.31
RNF43-206ENST00000582293 EXTL2Q9UBQ6 330 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 RNF150Q9ULK6 438 aa13.11□□□□□ -0.31
RNF43-206ENST00000582293 CCDC160A6NGH7 325 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 FAM25AB3EWG3 89 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 FAM25CB3EWG5 89 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 FAM25GB3EWG6 89 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
RNF43-206ENST00000582293 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 AMY1AP04745 511 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 AMY2AP04746 511 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 CRYBA1P05813 215 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 LSAMPQ13449 338 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 SPATA3Q8NHX4 192 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 LINC01006Q8NI28 216 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 RBM14Q96PK6 669 aaKnown RBP13.1□□□□□ -0.31
RNF43-206ENST00000582293 C16orf95Q9H693 158 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 ZNF702PQ9H963 129 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 PIPOXQ9P0Z9 390 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
RNF43-206ENST00000582293 MRPS7Q9Y2R9 242 aaKnown RBP13.1□□□□□ -0.31
RNF43-206ENST00000582293 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 RAB29O14966 203 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 TXNL1O43396 289 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 TUSC2O75896 110 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 OR2F2O95006 317 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 CT45A6P0DMU7 189 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 CT45A5P0DMU8 189 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 CT45A7P0DMV0 189 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 NAT1P18440 290 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 NFYAP23511 347 aaPredicted RBP13.09□□□□□ -0.31
RNF43-206ENST00000582293 CD1BP29016 333 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 PRSS3P35030 304 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 CBX5P45973 191 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 LINC00205P59089 165 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 BLCAPP62952 87 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 ANK2Q01484 3957 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 FOXL1Q12952 345 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 SNX29P2Q8IUI4 249 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 EAF1Q96JC9 268 aaPredicted RBP13.09□□□□□ -0.31
RNF43-206ENST00000582293 ABHD1Q96SE0 405 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 SLC25A33Q9BSK2 321 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 DCUN1D5Q9BTE7 237 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 ADAM30Q9UKF2 790 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 SIGLEC9Q9Y336 463 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 MMP24Q9Y5R2 645 aa13.09□□□□□ -0.31
RNF43-206ENST00000582293 IGKV1D-13A0A0B4J2D9 117 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 OR8U9P0C7N5 309 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 FAM106CPP0CH98 169 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 IGKV1-13P0DP09 117 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 LYSMD2Q8IV50 215 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 Q8N2B8 174 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 OR8U1Q8NH10 309 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 GINS4Q9BRT9 223 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 RAB18Q9NP72 206 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 PLSCR3Q9NRY6 295 aa13.08□□□□□ -0.32
RNF43-206ENST00000582293 STAB1Q9NY15 2570 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 SMIM31A0A1B0GVY4 71 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
RNF43-206ENST00000582293 RGS5O15539 181 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 IGLV2-14P01704 120 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 LPLP06858 475 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 CTXN2P0C2S0 81 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 TMEM11P17152 192 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 PROK1P58294 105 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 KRTAP10-3P60369 221 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 HNF4GQ14541 408 aa13.07□□□□□ -0.32
RNF43-206ENST00000582293 GLDNQ6ZMI3 551 aaPredicted RBP13.07□□□□□ -0.32
RNF43-206ENST00000582293 C16orf82Q7Z2V1 217 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms