RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C11orf54Q9H0W9 315 aaPredicted RBP20.89■□□□□ 0.93
PPP4R1-204ENST00000577393 RAB29O14966 203 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 IGHG2P01859 326 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 RPL39P5Q59GN2 51 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 FAM71F2Q6NXP2 309 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 SLC35E3Q7Z769 313 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 EDARADDQ8WWZ3 215 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 ABHD14BQ96IU4 210 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 NOL4LQ96MY1 436 aaPredicted RBP20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 AGMATQ9BSE5 352 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 ABCG5Q9H222 651 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 VCX3AQ9NNX9 186 aa20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 LIN7CQ9NUP9 197 aaKnown RBP20.88■□□□□ 0.93
PPP4R1-204ENST00000577393 FABP7O15540 132 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 ARFRP1Q13795 201 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 OR4X2Q8NGF9 303 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 OR4A4PQ8NGN8 299 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 LGALS14Q8TCE9 139 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 RASL11BQ9BPW5 248 aa20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 ZNF230Q9UIE0 474 aaPredicted RBP20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 ELF5Q9UKW6 265 aaPredicted RBP20.87■□□□□ 0.93
PPP4R1-204ENST00000577393 A0A1W2PRX2 142 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 TCRBV4S1A1TA0A5B7 111 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 PSMB11A5LHX3 300 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 LINC01548A6NM66 108 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 KIR2DS1Q14954 304 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 CDNFQ49AH0 187 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 ZNF329Q86UD4 541 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 MAFIPQ8WZ33 124 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 GHITMQ9H3K2 345 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 LINC00527Q9UJ94 153 aa20.86■□□□□ 0.93
PPP4R1-204ENST00000577393 MEGF8Q7Z7M0 2845 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 OPN1MWP04001 364 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 GSTT2P0CG29 244 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 GSTT2BP0CG30 244 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 OPN1MW2P0DN77 364 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 OPN1MW3P0DN78 364 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 TALDO1P37837 337 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 GPR12P47775 334 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 ARL6IP1Q15041 203 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 TIMM50Q3ZCQ8 353 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 FAM71E2Q8N5Q1 922 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 CHPT1Q8WUD6 406 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 R3HDM4Q96D70 268 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 YIPF6Q96EC8 236 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 RITA1Q96K30 269 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 RDH8Q9NYR8 311 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 RNF150Q9ULK6 438 aa20.85■□□□□ 0.93
PPP4R1-204ENST00000577393 CT45A6P0DMU7 189 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 CT45A5P0DMU8 189 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 CT45A7P0DMV0 189 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 SERPINB10P48595 397 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 ACTBP60709 375 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 MMDQ15546 238 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 IGSF11Q5DX21 431 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 IDNKQ5T6J7 187 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 FOXRED2Q8IWF2 684 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 OR4F17Q8NGA8 305 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 OR4F4Q96R69 305 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 CABLES2Q9BTV7 478 aa20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 TSSC4Q9Y5U2 329 aaPredicted RBP20.84■□□□□ 0.93
PPP4R1-204ENST00000577393 BET1O15155 118 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 TGFBR1P36897 503 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 STPG2Q8N412 459 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 OR5H6Q8NGV6 325 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 PHF21AQ96BD5 680 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 TOLLIPQ9H0E2 274 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 RHBDL2Q9NX52 303 aa20.83■□□□□ 0.93
PPP4R1-204ENST00000577393 TRIM64CA6NLI5 447 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 AIREO43918 545 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 SCGNO76038 276 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 CNTFRP26992 372 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 SCAND1P57086 179 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 SRSF7Q16629 238 aaKnown RBP eCLIP20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 FAM131AQ6UXB0 335 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 GLDNQ6ZMI3 551 aaPredicted RBP20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 HSPB9Q9BQS6 159 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 ZNF221Q9UK13 617 aa20.82■□□□□ 0.92
PPP4R1-204ENST00000577393 TRBV6-7A0A0A0MS04 114 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 AP4M1O00189 453 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 KCNAB3O43448 404 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 PROP1O75360 226 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 DTYMKP23919 212 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 SOX6P35712 828 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 KHDC1LQ5JSQ8 128 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 HACD4Q5VWC8 232 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 Q6ZS49 121 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 OR10J5Q8NHC4 309 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 ETV7Q9Y603 341 aa20.81■□□□□ 0.92
PPP4R1-204ENST00000577393 NOTCH1P46531 2555 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 IGKV1D-8A0A087WSZ0 117 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 H0YJW9 148 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 DIRAS3O95661 229 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 GSTP1P09211 210 aaKnown RBP20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 LSM3P62310 102 aaKnown RBP20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 DEFA6Q01524 100 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 ZNF260Q3ZCT1 412 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 SLC25A38Q96DW6 304 aa20.8■□□□□ 0.92
PPP4R1-204ENST00000577393 TMEM235A6NFC5 223 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms