RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 Q6ZS49 121 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 FOXRED2Q8IWF2 684 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 C5orf56Q8N8D9 126 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 EAF1Q96JC9 268 aaPredicted RBP7.82□□□□□ -1.16
CLN6-209ENST00000569336 GINS4Q9BRT9 223 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 CABLES2Q9BTV7 478 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 FUNDC2Q9BWH2 189 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 MRPS26Q9BYN8 205 aaKnown RBP7.82□□□□□ -1.16
CLN6-209ENST00000569336 WNT10AQ9GZT5 417 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 MMP27Q9H306 513 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 RNF167Q9H6Y7 350 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 LIN7CQ9NUP9 197 aaKnown RBP7.82□□□□□ -1.16
CLN6-209ENST00000569336 ZNF221Q9UK13 617 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 SPATA2Q9UM82 520 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 KCNK7Q9Y2U2 307 aa7.82□□□□□ -1.16
CLN6-209ENST00000569336 BET1O15155 118 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 AMY1AP04745 511 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 AMY2AP04746 511 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 CSF1P09603 554 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 CLEC2LP0C7M8 214 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 MC5RP33032 325 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 GPR12P47775 334 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 KRTAP10-3P60369 221 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 LSM3P62310 102 aaKnown RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 TMEM95Q3KNT9 176 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 CDNFQ49AH0 187 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 PDLIM3Q53GG5 364 aaPredicted RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 FBLN7Q53RD9 439 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 UBE2NLQ5JXB2 153 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 CENPVQ7Z7K6 275 aaPredicted RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 Q8N6K4 173 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 OR4X2Q8NGF9 303 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 OR13F1Q8NGS4 319 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 CHPT1Q8WUD6 406 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 KCTD12Q96CX2 325 aaKnown RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 NABP2Q9BQ15 211 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 GON7Q9BXV9 100 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 MRPL20Q9BYC9 149 aaKnown RBP7.81□□□□□ -1.16
CLN6-209ENST00000569336 DCSTAMPQ9H295 470 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 DIABLOQ9NR28 239 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 RDH8Q9NYR8 311 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 OR1A1Q9P1Q5 309 aa7.81□□□□□ -1.16
CLN6-209ENST00000569336 TRBV6-7A0A0A0MS04 114 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 TMEM235A6NFC5 223 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 APOA2P02652 100 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 OPN1MWP04001 364 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 CTXN2P0C2S0 81 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 SMIM18P0DKX4 95 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 OPN1MW2P0DN77 364 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 OPN1MW3P0DN78 364 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 OR3A3P47888 321 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 SLC35B1P78383 322 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 MMDQ15546 238 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 C5orf24Q7Z6I8 188 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 SLC35E3Q7Z769 313 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 NDUFA11Q86Y39 141 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
CLN6-209ENST00000569336 SLC25A46Q96AG3 418 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 SLC25A38Q96DW6 304 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 ABHD14BQ96IU4 210 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 RASL11BQ9BPW5 248 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 AGMATQ9BSE5 352 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 TOLLIPQ9H0E2 274 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 C11orf54Q9H0W9 315 aaPredicted RBP7.8□□□□□ -1.16
CLN6-209ENST00000569336 KIAA1456Q9P272 454 aa7.8□□□□□ -1.16
CLN6-209ENST00000569336 IGKV1-6A0A0C4DH72 117 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 PSMB11A5LHX3 300 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 H7C2Y5 167 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 AP4M1O00189 453 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 RBBP9O75884 186 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 IGHG2P01859 326 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 GSTT2P0CG29 244 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 GSTT2BP0CG30 244 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 SOX6P35712 828 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 TGFBR1P36897 503 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 RPS19P39019 145 aaKnown RBP7.79□□□□□ -1.16
CLN6-209ENST00000569336 ACTBP60709 375 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 CBX3Q13185 183 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 ZNF260Q3ZCT1 412 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 RPL39P5Q59GN2 51 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 IGSF11Q5DX21 431 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 FAM131AQ6UXB0 335 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 Q6ZS46 218 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 GPR141Q7Z602 305 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 FAM71E2Q8N5Q1 922 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 COMMD1Q8N668 190 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 SAMD12Q8N8I0 201 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 C11orf44Q8N8P7 122 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 Q8N9W7 124 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 OR4F17Q8NGA8 305 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 OR5AU1Q8NGC0 362 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 OR5H6Q8NGV6 325 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 NUDCD2Q8WVJ2 157 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 ACOT12Q8WYK0 555 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 MAFIPQ8WZ33 124 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 AP3S1Q92572 193 aa7.79□□□□□ -1.16
CLN6-209ENST00000569336 S100A16Q96FQ6 103 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms